Thermoanaerobacter sp. RKWS2: OEI98_000683
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Entry
OEI98_000683 CDS
T10300
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez03420
Nucleotide excision repair
thez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OEI98_000683 (pcrA)
03430 Mismatch repair
OEI98_000683 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thez03400
]
OEI98_000683 (pcrA)
Enzymes [BR:
thez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OEI98_000683 (pcrA)
DNA repair and recombination proteins [BR:
thez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OEI98_000683 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OEI98_000683 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
DUF3553
ResIII
REP_ORF2-G2P
DEAD
Tudor_1_RapA
crAss001_48
FWWh
GMT-wHTH
Motif
Other DBs
NCBI-ProteinID:
UZQ83596
LinkDB
All DBs
Position
682997..685132
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AA seq
711 aa
AA seq
DB search
MNNILGNLNDKQREAVMTTEGPLLILAGAGSGKTRVLTHRIAYLIKEKKVSPSNILAITF
TNKAAEEMKTRVEDLLGYIGDLWVSTFHSACVRILRRDIDKIGYDRNFVIFDTTDQKALI
QECLKELNLSEKQYPVKTVLNAISSAKDKMVTPEEYIYVFGNEYRSKKISEIYKLYQKKL
KKNNALDFDDIIIKTIELFKESPEVLDFYQRKFKYIMVDEYQDTNMPQYHFVNMLAQKYR
NLCVVGDDDQSIYGWRGADVKNILNFEKDYPEAKVIKLEQNYRSTKTILEAANYVIDNNI
RRKKKTLWTNNEEGERIILCELENEREEAEFVIQEIINLKERENRSFRDFAILYRTNAQS
RAFEEALMRVRIPYKVVGALRFYDRKEIKDIIAYLRILVNPYDDISFKRIINVPKRGIGA
ATIEALEATALEKDTSLFFAIDDAKVSQRAKNSLLEFKEFILELIDKKDTMTVSEVINYI
LEETGYIEELEKEESEQAEGRIENLNEFLNAAYEFEESSEDKSLEAFLSGITLVSDIDLA
GEIGESVVLMTLHSAKGLEFPIVFMVGMEEGVFPSFKSFTDEYELEEERRLCYVGITRSK
EKLYMTFARRRNLYGKSQYSSYSRFISEIPERFLVRYHELSKPREEYRPVSSYVERKTYE
KAQYNLGDKVEHKIWGIGTVVKVEGEEITVAFPNVGIKKLDLKFAPIKAIS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatattaggtaacctcaacgacaaacaaagagaagcagttatgactacagaa
ggacctcttttgatattagcgggagctggaagcggcaagactcgcgtcctaactcataga
attgcttatcttataaaagagaaaaaagtatccccttctaacatactggctatcactttt
acaaataaagcggcagaagaaatgaaaacaagagtagaagatttattaggttatataggt
gacctctgggtatctactttccattctgcctgtgtgagaattttaaggcgagatattgac
aaaataggctatgacagaaatttcgtcatatttgatactactgaccaaaaggctttaata
caggaatgccttaaagagctaaatttaagtgaaaaacagtatcctgtgaaaactgtctta
aatgctatttcttctgcaaaggataaaatggtaactccagaagagtatatttatgttttt
ggaaatgagtatagaagtaagaaaataagtgaaatatacaaattatatcaaaaaaagtta
aagaaaaacaatgcccttgattttgatgacataattataaaaactattgaactttttaag
gaaagtcccgaagttttagacttttaccagagaaaatttaaatacataatggtagatgaa
tatcaagacacaaatatgcctcaataccattttgtgaatatgttagcccagaaatacaga
aacttatgtgtggttggcgatgatgaccaaagcatatatggctggagaggggcagatgta
aaaaacatattaaactttgagaaggattatcctgaggctaaagttataaaattagagcaa
aactatcgttctaccaaaacaatattggaagcagccaattatgtcatagataataatata
agaaggaagaaaaagactttatggacaaataatgaagaaggagaaaggataattctctgt
gaattagagaatgagagggaagaggcggaatttgtgatacaggaaataatcaacttaaaa
gaaagagaaaatagaagttttagggattttgctattttatacaggacaaatgcccagtcc
cgtgcttttgaggaagccttaatgagggtgcgaattccttacaaagtggtcggagcttta
aggttttacgacagaaaagaaataaaagacataattgcctatttgcgtatacttgtaaat
ccttatgatgacatatcttttaaaaggataataaacgttcctaaaagaggtattggagct
gcaaccattgaagcattagaggctacagctttggagaaagacaccagtcttttttttgca
atagatgatgcaaaagtaagccaaagggctaaaaatagccttttagaatttaaggagttt
attttagaattaattgataaaaaagatacaatgactgtcagtgaagtaataaattacatt
ttagaagagactggatatatagaggagttagaaaaagaagaatcagagcaagcagaggga
agaatagaaaacctaaatgagtttttaaatgcggcttatgaatttgaagagtcttcagag
gacaaatctttagaagcatttttgtccggcataacattggtttctgatattgacttggct
ggagagattggagaaagcgttgttctcatgactttacattctgcaaaaggattagagttt
cctatagtctttatggtaggtatggaagaaggggtatttccttcttttaagtcatttaca
gatgaatatgaattagaagaggaaagacggctttgttatgttggcattacgaggtctaaa
gaaaaactatatatgacctttgcaagaaggagaaatttatacggcaaatctcagtacagc
tcctattctcgctttataagcgaaatacctgagaggtttttagtaagataccatgagtta
tcaaagccaagggaagaatataggcctgtatctagctatgtagaaaggaaaacttatgaa
aaggctcaatataatttaggagataaagtagagcataaaatatggggaataggtactgta
gtaaaagtagaaggagaagagattacagttgcctttccaaatgtgggcataaaaaagtta
gacttaaagtttgctcctattaaagctatttcttaa
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