Thermoanaerobacter sp. RKWS2: OEI98_001368
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Entry
OEI98_001368 CDS
T10300
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez02024
Quorum sensing
thez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OEI98_001368 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OEI98_001368 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thez03019
]
OEI98_001368 (hfq)
03036 Chromosome and associated proteins [BR:
thez03036
]
OEI98_001368 (hfq)
Messenger RNA biogenesis [BR:
thez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OEI98_001368 (hfq)
Chromosome and associated proteins [BR:
thez03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
OEI98_001368 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
UZQ84170
LinkDB
All DBs
Position
1322990..1323250
Genome browser
AA seq
86 aa
AA seq
DB search
MASSKAAINLQDIFLNQVRKEHVPVTVYLINGFQLKGLVKGFDNFTVVLESENKQQLLIY
KHAISTITPQKPVIFSASDKDEKKEE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcaaaagcagctattaatttacaggatatctttttaaatcaagtgagaaaa
gagcatgtaccagtaactgtctacttaatcaatggattccaattaaagggtttagtgaaa
ggatttgataattttacggtggtgttggagtcagagaacaaacagcaacttcttatctac
aagcatgctatttcgacaattacaccccaaaagcctgtaatcttctctgcttctgataag
gatgagaagaaagaagagtaa
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