Thermoanaerobacter sp. RKWS2: OEI98_001393
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Entry
OEI98_001393 CDS
T10300
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OEI98_001393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thez03019
]
OEI98_001393
03016 Transfer RNA biogenesis [BR:
thez03016
]
OEI98_001393
Enzymes [BR:
thez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OEI98_001393
Messenger RNA biogenesis [BR:
thez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OEI98_001393
Transfer RNA biogenesis [BR:
thez03016
]
Prokaryotic type
tRNA degradation factors
OEI98_001393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
S1_RRP5
Vac14_Fab1_bd
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UZQ84191
LinkDB
All DBs
Position
complement(1346634..1348736)
Genome browser
AA seq
700 aa
AA seq
DB search
MEERTFEMELAGRKLLVQIGKVAQQANGAAWVKYGDTVVLVTACASKEPREGIDFFPLTV
EYEERLYSVGKIPGGFIKREGKPSEKAILSARLIDRPIRPLFPHGYRNDVQVIATVLSVD
PDVQPEIVAMIGSSVALSISDIPFNGPTGAVAVGLVDGQFIINPNHEQREKSLMHLVVSG
TKDAIVMVEAGAKEIPEETMLDAIMYAHEYIKQIVEFIEGIVKEVGVPKSEVILHEIDKD
LEEKVRAYATEKIYNALRTAEKKERNDNLDKVEQEVLEHFKEEYPDNLADIDEVLYNIMK
EQMRKMITEERIRVDGRGLDDIRPIWCEVGVLPRTHGSAIFTRGQTQVLTVATLGALGDI
QILDGIGDEEAKRYMHHYNFPPYSVGEVRPLRGPGRREIGHGALAERALEPVIPSEEEFP
YTIRLVSEVLSSNGSTSQASVCGSTLALMDAGVPIKAPVAGVAMGLIKEGDVVSVLTDIQ
GIEDFLGDMDFKVAGTEKGITAIQMDIKIPGIDKEILKMALEKARRGRLYILSKMLEVIK
EPRKQLSVYAPRVIRMVVDPEKIREIIGPGGKTISKIIAETGVKIDIEEDGRLYITASDL
RSGERAKQMIEAITKDIAVGEIYLGKVLRITPFGAFVEIAPGKEGLVHISKLSKKRVQKV
EDVVKVGDDILVKVTDIDKLGRISLSRKDALPDEEEEERN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgaacttttgaaatggaactagccgggagaaagttgttagtccagatagga
aaagtagctcaacaagcaaatggagcagcttgggtaaaatacggggatactgtcgttcta
gttactgcctgtgcttccaaagaaccccgagaaggaattgacttttttcctttaactgtt
gagtacgaagaaagattgtactctgtcggtaaaattcctggtggtttcataaaaagagaa
gggaaacctagtgaaaaggcaattctctctgctcggttaattgacagaccaattaggcct
ttatttccccatggttatagaaatgatgtacaagttatagctacagttttatctgttgac
cctgacgtacaaccagaaatagtcgcaatgattggttcgtctgttgctctttcaatttct
gatattccttttaatggtcctacaggagcggtagcagtaggattagtcgatggacaattt
ataattaatcctaaccatgagcaaagagaaaaaagcttaatgcatttagtggtttcagga
acgaaagatgctattgtaatggtggaagcaggggcaaaagagattcctgaagaaactatg
ctagatgctataatgtatgctcacgaatatatcaaacagattgtagagtttatagaagga
atagttaaagaagtaggtgttccgaaaagcgaagtaattttacatgaaatagacaaagac
ctagaagaaaaagtaagagcctatgcaacagaaaaaatatacaatgcgttaagaacagca
gaaaagaaagagagaaacgacaacttagataaagttgaacaagaggttttagagcacttt
aaagaagaatatcctgataatcttgctgatatagatgaagtactttacaatataatgaaa
gaacaaatgcgaaaaatgataacagaggaaagaataagagtagatggcaggggccttgac
gacataagaccaatatggtgcgaagtaggagtgctacccagaactcacggttctgcgatt
ttcacaagaggacaaactcaagtgcttacagtagcaacattaggtgcattaggagatatt
cagattttagatggcataggagatgaagaagcaaaaagatatatgcatcattacaatttt
ccaccctacagtgttggagaagtaaggcctctaagaggtcctggtagaagggaaattggt
catggagctttagcagaaagggctttagaaccggtgattccttctgaagaggaatttccc
tatactataagattagtgtcagaagttttaagttccaatggttctacttctcaagctagt
gtttgtggcagtactttagctttaatggatgcaggagttccaataaaagctccagttgca
ggagttgctatggggcttatcaaagaaggagatgtagtttctgtactcactgatatacaa
ggaattgaagactttttaggggatatggacttcaaagtagcaggcacagaaaaaggaatc
acagcgatacaaatggatataaaaattcctggaattgacaaagaaattttgaaaatggct
ttagaaaaggcccgaaggggtagactatacattctcagcaaaatgttagaagttataaaa
gaaccgagaaaacagttatcagtatacgcacctcgtgttataaggatggtagttgaccct
gaaaaaattagagaaataatcggacctggtggcaaaaccataagtaaaattattgcagaa
acgggagtaaaaattgatattgaagaagatggcaggttatacattactgcttctgatttg
agatctggcgaaagagctaagcaaatgattgaggctataacaaaagatatagcagtagga
gaaatttatttaggaaaagtgcttagaataacaccctttggagcttttgtagaaattgct
cctggtaaagaaggacttgtccacatctctaagctatcaaaaaaacgggtacaaaaagta
gaagatgtagtaaaagttggcgatgacatattggtaaaagtcacagatatagacaaactc
ggaagaataagcctttcaagaaaagacgcattgcctgatgaagaggaagaagaaagaaac
taa
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