Thermoanaerobacter sp. RKWS2: OEI98_001419
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Entry
OEI98_001419 CDS
T10300
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez02020
Two-component system
thez02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OEI98_001419
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OEI98_001419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thez03021
]
OEI98_001419
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thez02035
]
OEI98_001419
Transcription machinery [BR:
thez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OEI98_001419
Bacterial motility proteins [BR:
thez02035
]
Flagellar system
Flagellar assembly proteins
Stator
OEI98_001419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
MOZ_SAS
Alpha-E
HTH_23
HJURP_C
DUF7785
COMPASS-Shg1
DUF1599
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
UZQ84217
LinkDB
All DBs
Position
complement(1371102..1371842)
Genome browser
AA seq
246 aa
AA seq
DB search
MSLAEEDIWKTYNSNKDPNLRNEIIIKYMPLVKHIVKKLIISDITQSEYEDLINQGVIGL
IDAIEKYQPSKGVKFETYATLRIRGEIIDYLRRKDWMPRSLKKKYKKIEETVETLQQKYN
REPTVEEITEACGLNETDVLKTLSYINVSNINSLEEAIENNFKLHAISNVELKNPEEEVL
YKELKRKLASAIESLPDKERLVITLYYYEDLNYKDISKILNLTESRISQIHTKAIKRIRE
MLGEYF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagcggaggaggatatatggaaaacttataattctaataaagacccaaattta
cgaaatgaaataataatcaagtatatgccacttgtcaaacatattgttaaaaaactcatt
atttctgatattactcaatctgaatatgaagacttaataaatcaaggagtaattggcctt
atcgatgcaattgaaaaatatcagcctagtaaaggtgtaaaatttgaaacttacgctact
ttaagaataagaggagaaataatagactatttgcgaagaaaagattggatgcctcgaagc
ctcaaaaagaagtacaaaaaaatagaagaaaccgtagaaacacttcaacaaaaatataat
agagaacctacagttgaagaaataacagaagcttgcggcttaaatgaaacagatgtttta
aagactttaagctatatcaatgtttctaacattaactctttagaggaagctattgaaaat
aattttaaattacatgctatttcaaatgtagaattaaaaaatccagaagaagaagtattg
tacaaagaactaaaaagaaagctagcaagtgctattgagagtttaccagataaggaaaga
ttagttataacattgtattattatgaagatttaaactacaaagacataagcaaaattttg
aatttaacagagtctagaatatcacaaattcatacaaaagctattaaaaggataagggaa
atgttaggcgaatacttttaa
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