Thermoanaerobacter sp. RKWS2: OEI98_001637
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Entry
OEI98_001637 CDS
T10300
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OEI98_001637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thez03400
]
OEI98_001637
Enzymes [BR:
thez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OEI98_001637
DNA repair and recombination proteins [BR:
thez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OEI98_001637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
Viral_helicase1
OB_YrrC
AAA_11
AAA_22
NTPase_1
nSTAND3
RsgA_GTPase
NAT10_TcmA_helicase
HHH_5
AAA_16
MeaB
AAA
Herpes_Helicase
ATPase_2
TraI_hel_assoc_N
UvrD-helicase
PIF1
AAA_29
NPHP3_N
SLFN-g3_helicase
T2SSE
AAA_14
UvrD_C
NB-ARC
nSTAND_NTPase5
MobB
AAA_12
ABC_tran
AAA_28
TsaE
ATP_bind_1
DEAD
AAA_5
AAA_17
AAA_18
SRP54
Rad17
AAA_26
cobW
Thymidylate_kin
AAA_7
CPT
HHH
Motif
Other DBs
NCBI-ProteinID:
UZQ81896
LinkDB
All DBs
Position
complement(1546785..1548935)
Genome browser
AA seq
716 aa
AA seq
DB search
MEYKEGCIVDRIIFEADNYTVAHLKHNGTTFTAVGIFPLKKGEIVNVKGTWEVHPKYGKQ
FVIQSLENKDAHLINTEDYTAADIEAFLKNLKGIGEKRAKLITSVFGTSTLDVLTINPYK
LVDIGIPESAVKTAYSQFMKERDMTELKLLLLPAGVTTKTVKKIYEKYGRNAVKILKENP
YRIADDIYGFGFIKADKIAQKLGIDAEAPERIQAALKYVLKSSERDGHVCLPRQILIKQT
AELLGLNSNMLNENISTLISRGDFIEEKGFIYTQDSYQKEKFIAEKLKRMLTAEPPARNL
KNVKEILKTVSAEANISYTKQQLNAVKEALLNKVLVITGGPGVGKTTIIKAVLEVLKQNG
WKVELAAPTGKAAKRLTEATGYEAKTIHRLLDAKYNEKTGRTYFAVNELNPLDADAVIVD
EVSMVGNDMMYFLLKGLKNETKLILVGDADQLPSVEAGNVLRDIIESGAIPVAKLTEIHR
QSSVSSIIYNSEKINMGSMPMFNLRDFIYDEALIPEHIVEIYMEELSYSKTPQNVQVLTP
IRKGDFGVKNLNSLIQQAVNPPAKEKKEIKYGDTVYRVGDKVIQTENNYEKMVFNGEDGI
IEDAYTDKEYNRHLVINFDGNIVDIAEEEIQNIELAYALTIHKSQGSEYDTVILVATSKH
FIMLKRNLLYTAVTRAKEKVIILGERKAVWIAVKNIDTSVRYTLLKERLQNFSKNF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtggagtacaaagaaggctgcatagtagacaggataatattcgaagcagataattatact
gttgcacatttaaaacataacggcaccacttttactgctgtcggaattttcccactcaaa
aaaggagaaatagttaatgtaaaaggaacatgggaagtacatcccaagtatggaaaacaa
ttcgttatccagtctcttgaaaacaaagatgcacacttaataaacacagaagattatact
gcagcagatattgaggcatttttaaaaaacttaaaaggaattggcgaaaaaagagcaaaa
ctgattacatcagtatttggaaccagtacgctcgatgttctaacaattaatccttacaaa
cttgttgatataggaataccggaatctgcagtaaaaacagcctactcccagttcatgaaa
gaaagagatatgactgaattaaaactgcttcttcttcccgcaggagttaccactaaaaca
gtaaaaaaaatttatgaaaagtacggcagaaatgcagtaaaaattttaaaagaaaatcca
tatagaattgcagatgatatttatggttttggctttataaaagcagataaaattgcgcag
aaacttggcatagatgcagaagcacctgaaaggattcaagctgctttaaaatatgttcta
aaaagcagtgaaagagacggacatgtatgtcttccgagacaaattcttataaaacaaaca
gcagaactgcttggtcttaacagtaacatgctgaatgagaacatatcaactttaatcagc
agaggagactttattgaggaaaaaggctttatatatacgcaggattcgtatcaaaaagag
aaattcatagcagaaaagctgaaaagaatgcttactgcggaaccaccagcaagaaaccta
aaaaatgtaaaggaaattcttaaaaccgtttctgcagaagcgaatatttcatacacaaag
cagcagctcaatgcggtaaaagaagctcttttaaacaaagtgctggtaataaccggaggc
cctggtgtaggaaaaacgacaattataaaagcagtgctggaggttttaaaacaaaacggc
tggaaggtagaacttgctgctcccacaggcaaagcagcaaaaaggcttacagaagcaacg
ggatatgaagcaaaaacaatacacaggcttttagacgcaaagtataacgaaaaaacagga
agaacctattttgctgttaatgagctgaatcctcttgatgctgatgcagttattgtcgat
gaagtatctatggtaggcaatgatatgatgtattttttgttaaaaggactaaaaaatgaa
acaaaacttatacttgtgggagacgctgatcagctgccttctgttgaagcaggaaatgtt
ttgagagacataattgaatcgggagcaatccctgtagcaaaacttacagaaattcacaga
cagagttctgtatcgtcaataatctacaactctgaaaaaataaacatgggttcaatgcct
atgttcaatctaagagactttatatacgacgaagcactaatccctgaacacattgttgaa
atttacatggaagagctatcatacagcaaaacaccacaaaatgtacaggttcttacacca
attaggaagggagatttcggagtaaagaacctgaattccttaattcagcaggcagtaaat
ccgccggcaaaagagaaaaaagagataaagtatggtgacacagtataccgcgtaggagat
aaagtcattcaaacagagaataactatgaaaagatggtattcaatggggaagatggaata
atcgaagacgcatatacggacaaagaatataacagacatcttgttataaattttgacgga
aacatagttgacatagctgaagaggaaatacaaaacatagagcttgcttatgcactgact
attcacaaatcccagggcagtgaatatgacacagtaattttagtagcgacctcgaaacac
ttcataatgctcaagcgaaatcttctttatacagcagttacaagagcaaaagaaaaagtt
ataattctgggtgaaagaaaagctgtatggattgcagtaaaaaacatagatacttctgtc
agatatactttacttaaagaaagactccaaaatttttcaaaaaatttttaa
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