Thermoanaerobacter sp. RKWS2: OEI98_002270
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Entry
OEI98_002270 CDS
T10300
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
thez Thermoanaerobacter sp. RKWS2
Pathway
thez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OEI98_002270 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thez03400
]
OEI98_002270 (uvrB)
DNA repair and recombination proteins [BR:
thez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OEI98_002270 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OEI98_002270 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
T2SSE
SWI2_SNF2
Kinesin
DUF87
Microtub_bd
P-loop_SecA
AAA_22
AAA_16
PHB_depo_C
nSTAND_NTPase5
Arm-DNA-bind_5
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UZQ82419
LinkDB
All DBs
Position
complement(2145447..2147432)
Genome browser
AA seq
661 aa
AA seq
DB search
MSGFKLVSNFKPTGDQPQAIEKLVEGVKKGYRFQTLLGVTGSGKTFTMANIIQKLNRPTL
VIAHNKTLAAQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYIPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPVDYENLMLSLRPGMIKDRDEIIKKLVDIQY
ERNDVNFTRGKFRVRGDVIEIFPASFSNKAIRVELFGDEIDRIAEIDVLTGEVLGLRKHV
AIFPASHYATSKDKLERAIKSIREELEQRYKELKDAGKIVEAERLKQRTNYDLEMLQEMG
YCQGIENYSRHISGRPPGSPPYTLLDYFPKDFLIFIDESHVTIPQIRGMYNGDRSRKEAL
VEYGFRLPSAFDNRPLTFEEFEERINQVIFVSATPGPYEIEHSEQVVEQLIRPTGLVDPE
VIVKPVKGQVDDLIGEIRKTVDKGFRVLVTTLTKKMAEDLTDYLKDMGIKVKYLHSDIET
IERVEIIRDLRLGKFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNAEGRVIMYADTVTNSMKRAIDETNRRRKIQMEYNKKHGITPKTVIKGVRDVIEATHV
AEEEQKYTRKKVKTYDPEIIKSTIEQLEKEMKEAAIELQFEKAAKLRDVIFELKKQLEEV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatttaagttggtatctaattttaaaccaacaggagaccaacctcaagctata
gagaaattagttgaaggggtaaaaaaaggatatagatttcaaaccttattgggtgtgacg
ggttctggaaaaacctttactatggctaatataatacaaaagttaaatcgccctactctt
gtcattgctcataataagactttggctgcgcaattatacagtgaatttaaagagtttttt
ccagacaatgcagtggaatattttgtaagttattatgactactaccaaccggaggcttat
ataccccaaactgatacttatattgaaaaagacgcttctataaatgaagaaatagataaa
ttgaggcactctgctacggcagctctttttgagcgaagagacgttataattgtcgccagt
gtttcttgtatatatggcttaggtgaccctgtagattacgaaaatcttatgctttcccta
aggccgggaatgataaaagatagggacgaaataattaaaaagcttgtagatatacaatat
gaaagaaatgatgtgaattttacaagaggcaaattcagggtaagaggagatgtaatagaa
attttccctgcttctttttccaataaggcgataagggttgagctttttggagatgaaatt
gacagaatagcggaaattgatgtattaacaggcgaagtactgggattaagaaaacacgtg
gctatatttccggcttctcactatgctacttcaaaagataaattggaaagagcaataaaa
agcattcgagaagaattggagcaaaggtataaagaacttaaagatgctggtaaaatagta
gaagctgaaaggctaaaacagagaacaaattacgatttagagatgctacaagagatgggc
tactgccaaggaatagaaaattattcaaggcatatttcaggaagacctccaggaagccct
ccttatacccttttagattattttcctaaagattttcttatttttatagatgagtctcat
gtgacaattcctcagatcagaggcatgtacaatggagacaggtcaaggaaagaagcatta
gtagaatacggatttagacttccttctgcttttgacaatcgtccccttacttttgaagag
tttgaagagagaataaatcaagttatctttgtttctgcaacaccagggccttatgagatt
gaacattcagagcaggttgttgagcagttaatacgaccgacaggtcttgtggatccagaa
gtgatagtaaagcctgttaagggacaagtagatgatttgataggggaaattagaaaaaca
gttgataaaggctttagagtgcttgttacaactcttacgaaaaaaatggctgaggattta
acggattatctcaaggatatgggaataaaagtaaaatatttacattctgatattgagacg
attgaaagggttgaaataataagagatttaaggctgggtaaattcgatgttttaataggc
ataaaccttttgagagagggattagacatacctgaggttgctttggtggcaatattagac
gcggacaaagagggatttttgcgttcagagacttccttaatacagactataggacgtgcc
gcaagaaatgcggaaggacgagtaataatgtatgcagatactgtaacaaattctatgaag
agagcaattgatgagacgaatagaagaagaaaaatacaaatggaatataacaaaaaacat
ggtataactccaaagacagtaattaagggagtaagagatgtaattgaagctactcacgtt
gctgaagaagaacagaagtacacaagaaagaaagttaagacttatgaccctgaaattatt
aagtcaactatagagcaacttgaaaaagaaatgaaagaagctgcaattgagctgcagttt
gaaaaggctgcaaaattgagagatgtgatttttgaattgaagaaacagttggaggaagta
gtttga
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