KEGG   Infirmifilum uzonense: MA03_06220
Entry
MA03_06220        CDS       T03924                                 
Name
(GenBank) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
thf  Infirmifilum uzonense
Pathway
thf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:thf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MA03_06220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thf03021]
    MA03_06220
Transcription machinery [BR:thf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MA03_06220
 Prokaryotic type
  Archaeal type
    TFE
     MA03_06220
SSDB
Motif
Pfam: TFIIE_alpha Zn_Ribbon_TF HTH_Crp_2 HTH_9 zf_UBZ Zn_Ribbon_YjdM TnsD IbrB_C WHD_RecQ_mid_bact Zn_ribbon_RPAB4 zf-C2H2_DHX34 zf_Tbcl_Rhp7 HTH_AsnC-type HTH_IclR DUF7129 Zn_ribbon_8 HypA Zn_ribbon_SprT Zn_ribbon_TFIIS BRISC_FAM175B_helical WHD_POLR3C Sigma70_r3 Zn_ribbon_15 HTH_69 PF0610-like_N FYVE DUF8617 HVO_A0114 B129_C2H2-zf DUF325 RPA_interact_C DUF8579 HTH_24 Dimerisation Zn_ribbon_6 Zn_ribbon_LysW IBR_1 HTH_DeoR Ribosomal_aS21 EDR4-like_1st Zn_ribbon_10 Zn_ribbon_TFIIB CoiA_N HTH_7 Zn_ribbon_RPB9 Crp HTH_60 HTH_15 Zn_ribbon_IS1595 Zn_ribbon_4
Other DBs
NCBI-ProteinID: AKG38924
UniProt: A0A0F7FHZ3
LinkDB
Position
1204462..1204968
AA seq 168 aa
MSSEKIIASLARKIHGERAEQIIRLLIEKVEMSDEDIAKELGTNVEEVRRILNELFESRL
VKYRRARDEIIGWYKYFWRITDEPIGRILEDRKRLTLSVLQKALNYEKSTEFYVCPNCKK
RFTLTEADENNYICDECGSILEPFDNSNAIAKLENSIKKLQKWIIENE
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtcctctgagaagataatagcctccttagcaaggaagatacatggagaacgcgcagaa
cagattatacggctcctgatcgagaaggtagagatgtctgacgaagatatagcaaaggag
ctaggtacgaacgtcgaggaggttaggagaatcctgaacgagttgtttgagtcgcgtcta
gttaagtacagacgtgcaagagacgagatcatcggatggtataagtatttctggaggata
acagacgagccgataggtaggatattggaagacaggaaaagactcacattaagtgtgctt
caaaaagcgttaaactacgagaaaagtacagagttttacgtatgtcccaactgtaaaaaa
cgttttacacttactgaagcggatgaaaacaattatatctgcgatgagtgcggctctatc
ttagaacccttcgataactctaacgctatagcaaaattagagaatagtattaagaagctt
cagaagtggattattgaaaacgagtga

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