Infirmifilum uzonense: MA03_06500
Help
Entry
MA03_06500 CDS
T03924
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thf
Infirmifilum uzonense
Brite
KEGG Orthology (KO) [BR:
thf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thf03016
]
MA03_06500
Enzymes [BR:
thf01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MA03_06500
Transfer RNA biogenesis [BR:
thf03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MA03_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AKG39412
UniProt:
A0A0F7FJ05
LinkDB
All DBs
Position
complement(1259540..1260070)
Genome browser
AA seq
176 aa
AA seq
DB search
MVGGRIIVLDRERANTLYFREGFYGRFFTVPKPKTPDVKKELELSPFDALYLLENGVLEL
YDEKHEVISIERFKDLARKSYENFDDAYAVYKDLRGKGYVVKSGLKFGSTFAVYKVGPGF
DHAPFLVHVLAYDSKLDPLEIIRAGRLSHSVRKKFLLAYRDPVDGNIRYFIFRWLM
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
ctggttggtggtcggatcatcgtacttgaccgtgaaagggcaaacactctttatttccgg
gaggggttctacggccgtttttttactgtcccaaagcccaaaacgccggatgttaaaaaa
gagctagagctctccccgtttgacgcgctgtacctgctcgagaatggggtcctagagtta
tacgacgagaaacacgaagtcatatctattgagaggttcaaggacctcgcaaggaagtcc
tatgaaaactttgatgatgcctatgctgtctacaaggatcttcgaggcaaggggtacgtc
gtgaagtccgggctaaagttcggttctacttttgctgtgtacaaggtgggaccaggcttc
gaccatgcccccttcctggttcacgtcctagcttatgatagtaagcttgacccgctcgag
ataatcagagcaggtaggctctcgcattcagtcaggaagaagttcctcctagcctatcgg
gatcctgtagacggtaacataaggtatttcattttccggtggctcatgtag
DBGET
integrated database retrieval system
