KEGG   Infirmifilum uzonense: MA03_06985
Entry
MA03_06985        CDS       T03924                                 
Name
(GenBank) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
thf  Infirmifilum uzonense
Pathway
thf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MA03_06985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thf03019]
    MA03_06985
Messenger RNA biogenesis [BR:thf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MA03_06985
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MA03_06985
SSDB
Motif
Pfam: ECR1_N Zn_ribbon_6 DZR Auto_anti-p27 Zn_ribbon_TiaS
Other DBs
NCBI-ProteinID: AKG39034
UniProt: A0A0F7FJ63
LinkDB
Position
complement(1345302..1345865)
AA seq 187 aa
MSEGDIVVPGDALGVEEEYLPGYGVYVDGGYLKAKLVGTPQLDMIHRVLELKSVKRTALP
LSPKDIVYASVEFIRDPVAYVRIFYVENKKTELQPPVSGVLTVSNISSSRVKSLYDVIGY
GDILRAYVAEPGGPPYLLSIKGREYGVLVARCPKCLTPMKLRGLRLVCPACRAKARRKTS
SKYALRG
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagtgagggcgacatagttgtacccggagatgctctaggcgtcgaagaagagtatctt
cccgggtacggggtatatgttgatggagggtatttgaaggctaaacttgtcggaacccct
caactagatatgattcaccgtgtcctcgagttaaagtctgttaaacgtacggctttaccc
ttatcaccgaaggacatagtgtatgcgagcgttgagttcatccgggaccctgttgcttac
gtgaggatcttttatgttgaaaataagaaaacagagctgcagccacctgtctccggagta
ctgacggtttcaaacatctcctcatcaagggtgaaaagcctctacgacgtcataggctat
ggggacatacttagggcctatgtagctgaacctgggggaccaccatacctgttatcgatt
aaaggacgggagtacggcgtcttggttgcccggtgccctaagtgccttactcccatgaag
ctgagggggctacggttggtctgtccagcttgtagggccaaggctcggaggaagactagt
agtaagtacgccctgaggggttag

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