Infirmifilum uzonense: MA03_06985
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Entry
MA03_06985 CDS
T03924
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
thf
Infirmifilum uzonense
Pathway
thf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MA03_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thf03019
]
MA03_06985
Messenger RNA biogenesis [BR:
thf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MA03_06985
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MA03_06985
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GFIT
Motif
Pfam:
ECR1_N
Zn_ribbon_6
DZR
Auto_anti-p27
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
AKG39034
UniProt:
A0A0F7FJ63
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All DBs
Position
complement(1345302..1345865)
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AA seq
187 aa
AA seq
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MSEGDIVVPGDALGVEEEYLPGYGVYVDGGYLKAKLVGTPQLDMIHRVLELKSVKRTALP
LSPKDIVYASVEFIRDPVAYVRIFYVENKKTELQPPVSGVLTVSNISSSRVKSLYDVIGY
GDILRAYVAEPGGPPYLLSIKGREYGVLVARCPKCLTPMKLRGLRLVCPACRAKARRKTS
SKYALRG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagggcgacatagttgtacccggagatgctctaggcgtcgaagaagagtatctt
cccgggtacggggtatatgttgatggagggtatttgaaggctaaacttgtcggaacccct
caactagatatgattcaccgtgtcctcgagttaaagtctgttaaacgtacggctttaccc
ttatcaccgaaggacatagtgtatgcgagcgttgagttcatccgggaccctgttgcttac
gtgaggatcttttatgttgaaaataagaaaacagagctgcagccacctgtctccggagta
ctgacggtttcaaacatctcctcatcaagggtgaaaagcctctacgacgtcataggctat
ggggacatacttagggcctatgtagctgaacctgggggaccaccatacctgttatcgatt
aaaggacgggagtacggcgtcttggttgcccggtgccctaagtgccttactcccatgaag
ctgagggggctacggttggtctgtccagcttgtagggccaaggctcggaggaagactagt
agtaagtacgccctgaggggttag
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