Infirmifilum uzonense: MA03_07730
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Entry
MA03_07730 CDS
T03924
Name
(GenBank) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
thf
Infirmifilum uzonense
Pathway
thf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MA03_07730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thf03019
]
MA03_07730
Messenger RNA biogenesis [BR:
thf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MA03_07730
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MA03_07730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N_2
KH_1
KH_6
RRP40_S1
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AKG39147
UniProt:
A0A0F7FJE8
LinkDB
All DBs
Position
complement(1466683..1467381)
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AA seq
232 aa
AA seq
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MNLYVKDRQIVVPGEPVGEAGKVSIEGHVYRVNKKFFSKVLGVVYVDEERKVARIIPLKG
KYIPVEGHKVIGKIVEVGFTNWVVDINSPYTAVLPVSEVTSKPVNISRNELARILDEGDL
ILAKIVSFDFTKDPVVSIRESKLGKIPRGSLVEISPQKVARIIGKKGSMISMIEEMLGVQ
LIVGQNGRVVVVGSDPLKEEIAVLVIKKIDAEAHISGLTDRIKEFIKERLGE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctctacgttaaggataggcagatagtagtcccaggtgagcctgtaggcgaggcg
ggaaaggtgagcattgaaggacatgtctaccgcgtaaacaagaaattcttctctaaggta
ctaggggtagtgtacgttgacgaggagagaaaggtcgcacggataattcctcttaaagga
aaatatatacccgttgagggccacaaggtcatcgggaaaatcgtggaggtgggttttact
aactgggttgtcgacatcaactctccctacactgccgttcttcccgtgagcgaggtgacc
tccaagcctgtcaacatctcccgcaacgagcttgcaagaatcctcgatgagggcgacttg
atactcgctaagatagtctcctttgacttcacaaaggacccggtagtcagtattagggag
tcaaagctgggtaaaatcccgagggggtcactggtggagatcagtcctcagaaggtcgca
cggataatcggtaagaaggggtctatgatctctatgattgaggagatgctcggggttcaa
ctcatagtcggtcaaaacggcagggttgttgtggtaggtagtgaccccttgaaggaggag
atagctgtcctggttataaagaagatagacgcagaagctcatatatcgggcttgacggat
aggattaaggagtttataaaggagaggctgggagaatga
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