KEGG   Infirmifilum uzonense: MA03_07930
Entry
MA03_07930        CDS       T03924                                 
Name
(GenBank) hypothetical protein
  KO
K15172  transcription elongation factor SPT5
Organism
thf  Infirmifilum uzonense
Brite
KEGG Orthology (KO) [BR:thf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    MA03_07930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thf03021]
    MA03_07930
   03019 Messenger RNA biogenesis [BR:thf03019]
    MA03_07930
Transcription machinery [BR:thf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     MA03_07930
  RNA polymerase I system
     MA03_07930
Messenger RNA biogenesis [BR:thf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     MA03_07930
SSDB
Motif
Pfam: Spt5-NGN KOW KOW5_SPT5 KOW4_SPT5 KOW2_Spt5 KOW7_SPT5 YajC
Other DBs
NCBI-ProteinID: AKG39176
UniProt: A0A0F7CLC6
LinkDB
Position
complement(1506109..1506585)
AA seq 158 aa
MGEKSSKGTRFYAFRVTVGQEYNVAQLLYNRAKGGGYRVYSIVVVPGVRGLVFIECDALY
EAQRLVMGMKHVRGAVRGAISYQEMEALIKPKPIVESVKVGDIIEIIRGPFAGMRGKIVS
VDPTRNEVKVELAEAVYVLPVTISAEDIKVVQKAEAQS
NT seq 477 nt   +upstreamnt  +downstreamnt
gtgggggagaagagctcgaagggcacacgtttctatgccttccgcgtcactgtgggccag
gagtacaacgtggcccagctgttgtataaccgtgcgaaaggcggtggctacagggtatac
tctatcgtcgtcgtgccgggggttaggggcctcgtgtttatagagtgtgatgccctgtac
gaggcccagaggctcgtaatggggatgaagcatgtacgaggagctgtcagaggggctata
agctatcaggagatggaggccttgatcaagccgaagcccatagtcgaaagcgtgaaagtc
ggggacatcatagagattataaggggcccgtttgcggggatgaggggtaagatagtcagc
gtcgaccccaccaggaacgaggtcaaggtggagttagccgaggccgtctacgtgttgcct
gtaaccatcagcgctgaggacataaaggtggtccagaaggctgaggcgcagtcctga

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