Thermogladius calderae: TCELL_0157
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Entry
TCELL_0157 CDS
T02127
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
thg
Thermogladius calderae
Pathway
thg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TCELL_0157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thg03019
]
TCELL_0157
03009 Ribosome biogenesis [BR:
thg03009
]
TCELL_0157
04131 Membrane trafficking [BR:
thg04131
]
TCELL_0157
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thg04147
]
TCELL_0157
Messenger RNA biogenesis [BR:
thg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TCELL_0157
Ribosome biogenesis [BR:
thg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TCELL_0157
Membrane trafficking [BR:
thg04131
]
SNARE
SNARE associated proteins
Others
TCELL_0157
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TCELL_0157
Exosome [BR:
thg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TCELL_0157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
CDC48_2
AAA_33
AAA_22
AAA_14
Vps4_C
AAA_28
RNA_helicase
nSTAND3
Mg_chelatase
IstB_IS21
AAA_18
AAA_24
Parvo_NS1
NPHP3_N
AAA_25
AAA_lid_PRS2_C
ATPase_2
TsaE
AAA_7
AAA_3
DUF815
ATPase
Sigma54_activat
ABC_tran
Zeta_toxin
AAA_17
SLFN-g3_helicase
Bac_DnaA
PhoH
AAA_11
bpMoxR
AAA_6
Zot
Molydop_binding
UFD1_N2
PUA
Motif
Other DBs
NCBI-ProteinID:
AFK50582
UniProt:
I3TCU4
LinkDB
All DBs
Position
144108..146327
Genome browser
AA seq
739 aa
AA seq
DB search
MSKTGEVKLRVLEARTSDVGRKIARMDERVMRSLGVESGDYIEVIGPKGSVIVRVLPARP
EDAGREVIRLDGYIRNKIGVGINEYVTVRPAKIEPATRVVLAPVAPEGYGFYGISLDPSY
VRRLLPPYTPVSRGEIIVIPFFGMELKMAVVSTHPTSNVYITENTEIVVREEPVKGEAVA
RGIPRVTWEDIGDLEEVKERIREIVELPLRHPELFNRLGIEPPKGILLYGPPGTGKTLLA
KALANEIGAYFIAINGPEIMSKFYGESEERLREVFKEAEQNAPAIIFIDEIDSIAPKREE
VVGEVEKRVVAQLLTLMDGLKERGRVIVIGATNRPDALDPALRRPGRFDREIEIPPPDKR
ARREILAVHTRNMPLAEDVDLTKLAEITHGYTGADLAALVKEAALAALRRFVKEENVDLN
QSIPASKLEKLKVTMGDFLNALKLVQPSLIREVFVEVPEVRWSDIGGLEDVKQQLREAVE
WPLKYPEIISKMGIEPPKGILLYGPPGTGKTLLAKAVATESGANFIAIRGPEVLSKWVGE
SEKAVREVFRRARQVAPCVVFFDEIDSIAPARGARYDSGVTDRIVNQLLTELDGIQPLRK
VVVIAATNRPDILDPALLRPGRFDRLVYVPPPDYKARLEIFKVHTRRVPLASDVNLEELA
RLTEGYTGADIAAVVREAVMLALRERLEARPVEMKYFLKALEVVKPSLTKEQIEEYERLA
SEIKRMSGVTRRAAPSPYG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagactggcgaggtcaagttaagggttctagaggcgagaaccagcgacgtcggc
aggaagatcgcgaggatggacgagagagtaatgaggagcctcggtgtagagtcaggcgac
tacatcgaggtcatagggcctaagggctctgtcatagtgagggtactccccgctaggccc
gaggacgctgggagggaggtgataaggctagacggctacataaggaataagatcggtgtc
gggataaacgagtacgtcactgtgaggcccgctaagatcgagccggctacaagggtcgtc
ttagcacccgtggcgcccgagggttacggtttctacgggatctccctagatccgagctac
gtgaggcgcctcctacccccctacacgcctgtgagcaggggggagataatcgtaataccg
tttttcggcatggagttgaagatggctgtagtgagcacgcaccctacgtcgaacgtgtac
ataaccgagaacactgagatagtggtcagagaagagcctgtgaagggggaggccgtcgcc
agggggatacccagagtcacatgggaggacataggcgacctggaagaggtcaaggagagg
atcagggagatcgtcgagctcccccttagacacccagagctcttcaacaggctgggtata
gagcccccgaaggggatactactctatggtccccccggtaccggcaagacactcctagcc
aaggcactggccaacgagatcggcgcctacttcatagcgatcaacggcccggagatcatg
agcaagttctacggtgagtcggaggagaggcttagagaagtgttcaaggaagccgagcag
aacgccccggccataatcttcatcgacgagatcgacagcatagctccgaagagggaggag
gtcgtaggagaggtcgagaagagagttgtagcacagttgctcacgttgatggacggtttg
aaggagagaggcagggtcatagtgataggcgccactaacaggcccgacgcgctggacccg
gctctaaggaggccgggcaggttcgacagggagatcgagataccgccacccgacaagaga
gctaggagggagatcctcgccgtccacaccaggaacatgcccctcgccgaggacgtggac
ttgactaagctggccgagatcacgcacggttacacgggggcagacctagcagcgctagtc
aaagaggcggctctcgcggctttgaggaggttcgtgaaggaggagaacgtcgacctcaac
cagtctatacctgccagcaagcttgagaagctcaaggtgacgatgggtgacttcctgaac
gcactcaaactcgtacagccctcgctgatcagagaggtcttcgtcgaggtacctgaggtc
aggtggagcgatataggcggtctagaggacgtcaagcaacagctcagggaggctgtcgaa
tggccgctcaagtaccctgagatcattagcaaaatgggtatagagcccccgaaggggata
ctactctatggtccccctggtactggtaagaccctgctggccaaggctgttgcgactgag
agtggtgctaacttcatcgctatcagagggcccgaggtactcagcaagtgggtgggcgag
tccgagaaagcagtaagagaagtgttcaggagggccaggcaggtcgccccgtgcgtggtc
ttcttcgacgagatagactcgatagcgccagctagaggagcgaggtacgacagcggcgtc
accgacaggatcgtgaaccagctactcaccgagctcgacggtatacagcccctcaggaag
gttgtcgtgatagcggccaccaatagaccggacatactagaccccgcactactgaggcca
ggcaggtttgacaggctcgtctacgtgcccccgccggactacaaggctaggctcgagatc
ttcaaggtgcacacgaggagagtcccgttggcgagcgacgttaacctggaggagctagcg
aggctcacggagggttacactggcgccgacatagccgctgtcgtgagagaagcggtgatg
ctcgccttgagggagaggctcgaggccaggcctgtggagatgaagtacttccttaaggcg
ctcgaggtcgtgaagccgagcctgacaaaggagcagatcgaggagtacgagaggctcgct
tcggagatcaagagaatgagcggtgtcactagacgcgccgccccctctccatacggttag
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