Thermogladius calderae: TCELL_0165
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Entry
TCELL_0165 CDS
T02127
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thg
Thermogladius calderae
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thg03016
]
TCELL_0165
Enzymes [BR:
thg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TCELL_0165
Transfer RNA biogenesis [BR:
thg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TCELL_0165
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
AFK50590
UniProt:
I3TCV2
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All DBs
Position
complement(152135..152692)
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AA seq
185 aa
AA seq
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MTKCFSILLHNRVIVPDPACGSAIYWSSYYGSLLGIEKPRSRSDQAPLELSLIEALYLLE
KNLLRVYADRGDGPTPLTPEELYSIGLERVNRFRELYVVYKDLRERGFVVRRGLKFGCDY
LVYRRGPGIDHAPYGVQVYSKDESTDPIEIVRMGRLLHSVRKRLIVAIVDEKNTINYLLF
SWWKP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtgcttctctatcctgctacacaaccgggtaatagtacccgaccctgcatgc
ggctctgcgatatactggagctcgtactacggctccctcctagggatcgagaagccgagg
agtaggagcgaccaggcacccctagagctctctctcatagaggcgctctacctactcgag
aaaaacctcctgagggtctacgccgatagaggcgacgggcccacacctctcaccccggag
gagctgtactcgatcggcctagagagggtcaacaggttcagggagctatacgtcgtctac
aaagacttgagggagagagggttcgtcgtgaggaggggcctcaaattcggttgcgactac
ttagtctacaggcgcgggccggggatagaccacgccccttacggcgtccaggtgtacagt
aaagacgaatcgacagaccctatcgagatagtgaggatggggaggctcctccactcggtg
aggaagaggctcatagtagcaatcgtagacgagaagaacactatcaactacctgttgttt
agttggtggaagccttaa
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