Thermogladius calderae: TCELL_0300
Help
Entry
TCELL_0300 CDS
T02127
Name
(GenBank) tRNA intron endonuclease, catalytic-like protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thg
Thermogladius calderae
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thg03016
]
TCELL_0300
Enzymes [BR:
thg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TCELL_0300
Transfer RNA biogenesis [BR:
thg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TCELL_0300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AFK50725
UniProt:
I3TD87
LinkDB
All DBs
Position
complement(291024..291527)
Genome browser
AA seq
167 aa
AA seq
DB search
MSVVVRVDKSSCTGIVEDSNVQELEEKWFGEKSGDVLVLNVIELSYLLLTGRAVADVEGK
VVRSLEDLMKTSAECFKDYSWSNLVVYKDLRDRGRRVRIVDKNTFMMKDKHGDIRLVLVL
EEKSRLGVKDILEFAEKSTRNNVSPIVAVVSLQGEVTYYEVHKIEPV
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagttgtaagggtagacaagagctcttgtacaggtattgtagaggacagtaac
gttcaagagctcgaggagaagtggtttggagagaaaagcggtgacgtcctagtcctgaac
gttattgaactatcctacctgctgctcaccgggagagccgtcgccgatgtcgaaggtaag
gtcgtgaggagcctcgaagacctcatgaagacgtctgcggagtgctttaaggactactct
tggtctaacctggtcgtttacaaagacctaagagacagaggtagaagagtcaggatagtt
gacaagaatactttcatgatgaaagacaagcacggtgacattagactagtcttagtccta
gaggagaagagcaggctaggagtcaaggacatactcgaattcgcagagaagtccactagg
aacaacgtgtcccctatcgtcgccgtggtgagcctccaaggggaggtaacgtactacgag
gtccataagatcgagcccgtatag
DBGET
integrated database retrieval system
