Thermogladius calderae: TCELL_0385
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Entry
TCELL_0385 CDS
T02127
Name
(GenBank) 50S ribosomal protein L24
KO
K15172
transcription elongation factor SPT5
Organism
thg
Thermogladius calderae
Pathway
thg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TCELL_0385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thg03021
]
TCELL_0385
03019 Messenger RNA biogenesis [BR:
thg03019
]
TCELL_0385
Transcription machinery [BR:
thg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TCELL_0385
RNA polymerase I system
TCELL_0385
Messenger RNA biogenesis [BR:
thg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
TCELL_0385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
Ribosomal_uL24m-like
SH3_KIN17_C
DTX3L_a-b
Motif
Other DBs
NCBI-ProteinID:
AFK50810
UniProt:
I3TDH2
LinkDB
All DBs
Position
355529..356002
Genome browser
AA seq
157 aa
AA seq
DB search
MSSEEAKIYAVRTTVGRELDVVLILERRIKELAEKGEDVGIASLIIPPGVRGYIFIEATK
PTGIYKVISEVKHLKSSSLILVSKEEIERLIKPKPVVESIKVGDIVEIVRGPFKGMRAQV
TNVDKNKNMLTVSILEATHAIPITISGEYVKPVKKGD
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggaggaggctaagatatatgcggtaaggaccaccgtagggcgtgagctggac
gtagtcctcatcctggagaggaggataaaggagctggcagaaaaaggcgaggacgtcggc
atagccagcctgataataccccctggtgtaagaggttacattttcatcgaggctacaaag
cccacgggcatatacaaggtcatatccgaggtaaagcacttgaagagctcgtctctcata
ctagtatccaaggaggagatagagaggctcatcaagccaaagccggtagtggagtccatc
aaagtcggcgacatagtagagatcgtgagagggccgttcaagggcatgagagctcaggtc
accaacgtggataagaataaaaacatgcttacggttagcattttagaagctactcacgcg
atacctataactatctcaggtgagtacgtgaagcctgttaagaagggtgattag
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