Thermogladius calderae: TCELL_0453
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Entry
TCELL_0453 CDS
T02127
Name
(GenBank) RNA binding S1 domain protein
KO
K07573
exosome complex component CSL4
Organism
thg
Thermogladius calderae
Pathway
thg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TCELL_0453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thg03019
]
TCELL_0453
Messenger RNA biogenesis [BR:
thg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TCELL_0453
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TCELL_0453
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1
FtrD-like
Trm112p
HypA
Zn_Ribbon_TF
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AFK50878
UniProt:
I3TDP0
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All DBs
Position
412002..412568
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AA seq
188 aa
AA seq
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MSSDKVTPGDVLGVLEEFIAGSGVYEDASGRLRSSVVGVVFADKLRKSVNVKPAVAKTLV
PRVGDIVEGVVVYMNDDLAFVRIYWIEDKRSVKPVSMTGVIHVSQASQAYVETMFDIVRV
SDVVKAKVIGGKGVFQLSIKEPQLGVVYARCNYCGGELVYEGGRLVCSVCGQVNKRKVST
NYVLVKGQ
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgagtagcgacaaggtcacaccgggcgatgtcttgggggtcctagaggagttcatagcg
ggtagcggcgtatacgaggatgctagtgggaggctcaggagtagcgtcgtaggcgtggtt
ttcgcggataaattgaggaagtccgtgaacgtgaaacccgctgtcgccaagactctcgta
ccgcgtgtaggggacatcgtagagggtgtagtggtgtacatgaacgacgacctggcattt
gtgagaatttactggattgaagacaagagatctgttaagcccgtaagcatgactggggtt
atacacgtctcgcaggccagccaagcatacgtggagacgatgttcgacattgtcagggtc
agcgacgtggtcaaagccaaggtgataggcgggaaaggagtattccagctctccatcaag
gagccgcaactgggtgtcgtgtacgcgaggtgtaactactgcggaggcgagctggtgtac
gagggtggcaggctggtctgtagcgtgtgtgggcaggttaacaagaggaaggtgagcacg
aactacgtactagtgaagggtcagtga
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