KEGG   Thermogladius calderae: TCELL_0453
Entry
TCELL_0453        CDS       T02127                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K07573  exosome complex component CSL4
Organism
thg  Thermogladius calderae
Pathway
thg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TCELL_0453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thg03019]
    TCELL_0453
Messenger RNA biogenesis [BR:thg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TCELL_0453
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     TCELL_0453
SSDB
Motif
Pfam: ECR1_N S1 FtrD-like Trm112p HypA Zn_Ribbon_TF A2L_zn_ribbon
Other DBs
NCBI-ProteinID: AFK50878
UniProt: I3TDP0
LinkDB
Position
412002..412568
AA seq 188 aa
MSSDKVTPGDVLGVLEEFIAGSGVYEDASGRLRSSVVGVVFADKLRKSVNVKPAVAKTLV
PRVGDIVEGVVVYMNDDLAFVRIYWIEDKRSVKPVSMTGVIHVSQASQAYVETMFDIVRV
SDVVKAKVIGGKGVFQLSIKEPQLGVVYARCNYCGGELVYEGGRLVCSVCGQVNKRKVST
NYVLVKGQ
NT seq 567 nt   +upstreamnt  +downstreamnt
ttgagtagcgacaaggtcacaccgggcgatgtcttgggggtcctagaggagttcatagcg
ggtagcggcgtatacgaggatgctagtgggaggctcaggagtagcgtcgtaggcgtggtt
ttcgcggataaattgaggaagtccgtgaacgtgaaacccgctgtcgccaagactctcgta
ccgcgtgtaggggacatcgtagagggtgtagtggtgtacatgaacgacgacctggcattt
gtgagaatttactggattgaagacaagagatctgttaagcccgtaagcatgactggggtt
atacacgtctcgcaggccagccaagcatacgtggagacgatgttcgacattgtcagggtc
agcgacgtggtcaaagccaaggtgataggcgggaaaggagtattccagctctccatcaag
gagccgcaactgggtgtcgtgtacgcgaggtgtaactactgcggaggcgagctggtgtac
gagggtggcaggctggtctgtagcgtgtgtgggcaggttaacaagaggaaggtgagcacg
aactacgtactagtgaagggtcagtga

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