Thermogladius calderae: TCELL_0517
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Entry
TCELL_0517 CDS
T02127
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
thg
Thermogladius calderae
Pathway
thg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TCELL_0517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thg03021
]
TCELL_0517
Enzymes [BR:
thg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TCELL_0517
Transcription machinery [BR:
thg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TCELL_0517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AFK50942
UniProt:
I3TDV4
LinkDB
All DBs
Position
471277..474732
Genome browser
AA seq
1151 aa
AA seq
DB search
MTYKPSIEDLWTLMKAFFEEKGLVRQHLDSYNRFVRELLPEIMREYREIPITADLKLVIK
DYKIGKPVWKNIEGVESEVTPMECRLRNLTYAAPVTAKVALVDREGSHKEQDIKLMDLPV
MLKSELDPLSKLSKEELKQVGEDPDDPGGYFIINGAEKVLIAQEDLASNNIIVDISPEGS
STTHVAKVVSTAKGRRSQLVIERRKDGVFYANFQGRKIPAPILMIALGLATEYELMNAVS
FDPDVQIQLLPSISEVQSVLPRLEIPPGVSEEEIRRLEEEYRKKVVEEALDFIGARMAVG
RPREERVRRAERALDEYLLPHIGTDPSPSTRLKKALFIGQMINKIIEVYLGRRQPDDKDH
YRNKRLKLAGDLLATLLRHAIVVSFIREVKTSIEKTYSKYRKVDLKMVIKPNIITDRISH
AMATGNWPGGRTGVSQILDRTNMLSTLSHLRRVVSPLARAQPHFEARELHFTSWGRMCPF
ETPEGANIGLVKNLALMAHISVGFDEKEVEQTLVKLGVKTLPQILDELKESIKRGEAYSG
TAEYSSWSKVYLNGRLIGLYPDGGELARKIRELRRQGKISSEVNVAYFRTEYLNEVYVNC
DAGRIRRPLLVVENGELKLKPEHIKQLKNGNLKFEDLVKRGVIEYLDPDEEENAYIALNP
DELSIEHTHLEIWVPSILGIVASIIPYPEHNQSPRNIYEAAMGKQSLGLYAANFQRRMDS
RGHFLHYPQKPLAQTKPLEVIGYNEKPAGQNMVVAVLTYTGYNIEDAVIMNKSSIERGLG
RSTFFRVYSTVEYKYPGGQEDKISVPPSDIRGYKGPRAYEKLDEDGIVAPETYVVGGDVL
IGKVSPSRFMITQELTGSEQVKQDTSVVMRHEEKGIVDVVMITTDSDGNKLVKVRVRDLR
IPELGDKFASRHGQKGVVGLIIPQYDMPFTEDGITPDLIINPHAFPSRMTVGQLIESIAG
KVAALEGRLVDGTPFFKEDPEKLMVVLKRHGYPETGEEAMYDGRTGELMRAPVFIGIVYY
QKLHHMVSDKIHARARGPVQILTRQPTEGRARAGGLRWGEMEVDCLVGHGAASLLKETMI
DRSDKAVIYVCELCGHIGYYDRIRDRYVCPVHKEKGVLKPVEVSYSFKLLIQELMSMAIM
PRLKLEDVREA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtacaagccctccatcgaggacttgtggactctaatgaaggcttttttcgaagag
aagggtcttgtgcgccagcacctggacagttacaacaggtttgtccgcgaactactccct
gagataatgagggagtaccgggagatcccgataacggccgacctcaagctggtgataaaa
gactacaagatcgggaagccggtttggaagaatatcgagggggtcgagagcgaagtaacc
cccatggagtgcaggctcaggaacctgacctacgctgccccggtgacggcgaaggtcgcc
ctagtagacagggagggctctcacaaggagcaggatataaagctcatggacctcccggtc
atgttgaagtccgagctagacccgctaagcaagctgtccaaggaggagcttaagcaggtc
ggcgaggaccccgacgatcccggcggttacttcataataaacggcgccgagaaggtcttg
atagcccaggaggacctggcgagcaacaacataatcgtagacatatccccggagggctcg
tcgacaacacatgtagcgaaggtcgtcagcactgccaagggtaggagaagccagctagtg
atagagaggaggaaggacggagtcttctacgcgaacttccaagggaggaagataccggct
ccaatattgatgatagccctagggctggctacggagtacgagctgatgaacgcggtgtcc
tttgacccggacgtccagatccagctcctaccatccataagcgaagtccagtcggttctg
ccgaggctcgaaatcccgccgggggtctccgaagaggagatccgtagactagaagaagag
tacaggaagaaagtagtcgaggaggccctcgacttcataggtgcgaggatggccgtcggc
aggcctagagaagagagggtcaggagagcggagagggcactagacgagtacctcctacct
cacattggcacagacccgagcccctcgacgaggctgaaaaaagccctgttcatagggcag
atgataaacaaaataatcgaggtctaccttggcaggagacaacccgacgacaaggaccac
tacaggaacaagaggctcaagctcgcgggagacctcctcgcaacgcttctcaggcacgca
atcgtcgtgtcgtttatcagggaagtgaagactagcatcgagaagacctacagcaagtac
aggaaagtagacctaaagatggttatcaagcccaacataataaccgacaggatctcccac
gcgatggccacaggtaactggcctggaggcaggactggcgtcagccagatactagacagg
acaaacatgctgagcactctcagccacctccgtagagtcgtctcgccgctagctcgcgcg
caaccccacttcgaggctagagagcttcacttcacttcttggggtaggatgtgccccttc
gagacccccgagggcgcgaacataggtctcgtcaagaacctcgccctgatggctcacatt
agtgtgggcttcgacgagaaggaggtcgagcagacgctcgttaaactaggcgtgaaaacc
ctgcctcagatactggacgagctcaaggagagtattaagagaggagaggcctactctggc
acagcggagtacagttcctggagcaaggtctacctgaacggcaggctgatagggctctac
ccggacggcggtgagctcgcgaggaagattagggagctacgcaggcagggcaagatctcg
tcggaggtcaacgtggcctactttagaacagagtacctcaacgaggtctatgtcaactgc
gacgccgggcgtatcaggaggcctcttctcgtggtagagaacggcgagctaaagctcaaa
cccgagcacataaagcagcttaagaacgggaatttgaaattcgaggacctggtcaagagg
ggtgttatagagtacttagaccccgacgaggaagagaacgcgtacatagccctaaacccc
gacgagttgtctattgaacacacgcacctcgagatatgggttccgagcatcctcggcata
gtggcctctattataccgtacccagaacacaaccagagcccgaggaacatatacgaggct
gccatgggtaagcagagcctcggcttgtacgctgcgaacttccagaggaggatggactct
agagggcacttcctccactacccccagaagcctctagcccagactaagccgctcgaggta
atcggttacaacgagaagcctgctgggcagaacatggtggtggccgtgttgacttacacg
ggctacaacatcgaggacgcggtcataatgaacaagagtagtattgagaggggtctaggc
cgtagcaccttcttccgtgtttactcgacggtcgagtacaagtaccccggtggacaggag
gacaagatatccgtcccgccgagcgacataaggggctacaagggcccgagggcctacgag
aagctagacgaggacggtatcgtagccccggagacatacgttgtaggcggcgacgtcctg
atcgggaaggtcagcccttcaaggttcatgatcacgcaggagctgactggtagcgagcag
gtcaagcaggacacaagtgtcgtgatgaggcacgaggagaagggtatagtggacgtcgtc
atgataaccactgacagcgacggtaacaagctcgtcaaggtgagggtgagggacctcagg
atacctgaactaggagacaagttcgcctcgaggcacggccagaagggggtagtaggcctc
atcatcccgcagtacgacatgcccttcaccgaggacgggattacaccagacctcataatc
aacccccacgcgttccctagcaggatgactgtggggcagctgatcgagagcatagcgggt
aaggtggccgcactagagggtaggcttgtcgacggtacacccttcttcaaagaggacccg
gagaagctgatggtcgtactgaagaggcacggctacccggagacaggtgaagaggccatg
tacgacggtaggactggcgagctgatgagagcccctgttttcataggcatagtctactac
cagaaactacaccacatggtcagcgacaagatccacgctagggctaggggcccggtgcag
atcctgacccggcagcccactgagggcagggctagagcaggcgggcttagatggggtgag
atggaggtagactgcttggtaggccacggcgcggcctcgctactgaaggagacgatgata
gacagaagcgacaaggcggtgatatacgtgtgcgagttgtgtggccacataggttactac
gacaggatcagggacaggtacgtgtgccccgtccacaaggagaaaggggttctaaaaccc
gttgaggtatcgtacagcttcaagttgctcatacaggagctcatgagtatggccatcatg
ccccgtctaaagctggaggacgttagggaggcttga
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