Thalassospira sp. GO-4: M9H61_00755
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Entry
M9H61_00755 CDS
T10246
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo03020
RNA polymerase
Brite
Enzymes [BR:
thgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M9H61_00755 (rpoC)
Transcription machinery [BR:
thgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M9H61_00755 (rpoC)
DNA repair and recombination proteins [BR:
thgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M9H61_00755 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
URK18064
LinkDB
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Position
154235..158428
Genome browser
AA seq
1397 aa
AA seq
DB search
MNELMKIFGQPQGTQSFDQIRIQIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYRGIICEKCGVEVTLAKVRRERMGHIELAAPVAHIWFMKSL
PSRLGLLLDMTLKDLERILYFENYVVIEPGLTPLKMGELLSEDQYMTAQEEYGEDSFRAG
IGAEAIRDMLAAIDLDEERETAKIDLKETNSEAKRKKLVKRLKLIEAFQESGARPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRPITGANKRPLKSMSDMLKGKQGRFRQNLLGKRVDYSGRSVITVGP
NLKLHQCGLPKKMALELFKPFVYAKLELYGMATTIKAAKRMVEKERAEVWDILEQVIREH
PVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARTLMMSTNNILSPASGKPIIVPSQDIVLGLYYISMERDGQPGEGMSFVNIAEIEQALDE
GVVTLHSKINARYHTVDENNERITVRVATTPGRMLLSELLPRHPRIPFSTINKLLTKKDV
SNVIDVVYRHCGQKETVIFADRMMGLGFNWACKAGISFGKDDMIIPDAKEPLVGGTHDKV
KEYEQQYQDGLITRGEKYNKVVDAWAQCTDDVSEAMMKVISATAEGDNVNSVYMMAHSGA
RGSAAQMRQLAAMRGLMAKPDGSIIETPIISNFKEGLTVQEYFNSTHGARKGLADTALKT
ANSGYLTRRLVDVAQDCIITQHDCGTDRGLDIAAVVDSGEVIETLSDRILGRFTADEIVD
PSTGEVIVPKNEMVEEDHLDLIEKAGVETARIRSVLTCDAETGVCGHCYGRDLARGTTVN
IGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEVSGVEANFDATVKLKNRAVVENSA
GVNIVMARNLEILLIDKTGRERAKYRVPYGAKLLTDEGAQVTRGQKLAEWDPYTLPIITE
KEGYVNYVDLLENVTIREVYDEATGIASKTVIDWKSMPKASDLKPRVTLRNEAGEVINLD
NGLEARYFLSVDAILSVENGQKVHAGDVLARIPREGSKTRDITGGLPRVAELFEARKPKE
HAIISDIPGRVEFGKDYKNKRRVIVHPLEDSGLTEPVEYLIPKGKHLAVQEGDFVEKGDQ
LLDGSPVPHDILRVMGVPALADYLVNEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITKP
GDTTLLVGEIIDRVDFDAENERALKEGGELAEGAPVLQGITKASLQTHSFISAASFQETT
RVLTEAAVSGKTDTLIGLKENVIVGRLIPAGTGAVMNRFRALAAERDKSVQIEAEEEIGD
NFGPQADADTASLPAGE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttgatgaagatcttcgggcagccgcagggcacccagagcttcgatcagatc
cggattcagattgccagcccggagcgtatccgctcctggtcgttcggcgagatcaagaaa
ccggaaaccatcaactaccggaccttcaaaccggagcgcgacggcctgttctgtgcgcgc
atttttggtccggtgaaggattacgaatgcttgtgcggcaagtacaagcgtatgaagtat
cgcggcattatctgtgaaaaatgcggcgtcgaagtgactctggccaaagtacgtcgtgaa
cgtatgggccatatcgaactggcggcacctgttgcccatatctggttcatgaagtcgctg
ccgagccgtctgggtctgctgctggacatgacgctcaaggatcttgagcgcattctgtac
ttcgaaaactatgtggttatcgaaccgggccttaccccgcttaaaatgggtgagctcctg
tccgaagaccagtatatgactgcccaggaagaatatggcgaagacagcttccgtgccggt
atcggtgccgaagccatccgcgatatgcttgcggcaatcgaccttgatgaagaacgcgaa
accgcaaaaatcgacctcaaggaaaccaattccgaagccaagcgcaagaagctggtcaag
cgtctcaagctgattgaggccttccaggaatccggcgcgcgcccggaatggatgatcctt
gaagtgattccggtcattccgccggaactgcgtccgctggttccgcttgatggcggccgt
ttcgcaacctcggatctgaacgacctttaccgtcgtgtcatcaaccgtaacaaccgtctg
aagcgcctgatcgagcttcgtgcgcctgacatcatcgtgcgtaacgaaaaacgtatgctt
caggaatcggttgatgcgctgtttgacaacggtcgccgcggtcgtccgatcaccggtgcc
aacaagcgtccgctcaaatcgatgtcggacatgctcaaaggcaagcagggtcgtttccgt
cagaaccttctgggtaaacgcgtcgactattccggtcgttccgttattaccgtgggtccg
aacctgaaactgcatcagtgcggtctgccgaagaaaatggcgctcgaactgttcaagccg
ttcgtttacgcgaagctggaactgtacgggatggccaccaccatcaaggctgcaaagcgc
atggtggaaaaagagcgcgccgaagtttgggatatccttgaacaggttatccgtgaacat
ccggtcatgctcaaccgtgcaccgaccctgcaccgtcttggtatccaggcgttcgagcct
accctgatcgaaggtaaggccatccagctgcacccgctcgtttgtactgcgttcaacgcg
gacttcgacggtgaccagatggctgtccacgtaccgctgtcgcttgaagcccagcttgaa
gcacgtaccctgatgatgtcgaccaacaacatcctttcgccggcatcgggtaaaccgatc
atcgtgccgtcgcaggatattgtccttggtctgtactacatctccatggagcgtgacggt
cagccgggcgagggcatgtcgtttgtcaacatcgcggagatcgaacaggcactggacgag
ggtgttgtcaccctgcattccaagatcaatgcccgttaccacacggttgatgaaaacaac
gaacgcatcaccgttcgtgttgcaaccaccccgggccgcatgttgctgtcggaacttctg
ccgcgtcatccgcgcattccgttctcgaccatcaacaagctgctgaccaaaaaagacgtc
tcgaacgttatcgatgtcgtttaccgtcactgtggccagaaagagaccgttatctttgct
gaccgcatgatgggccttggtttcaactgggcatgtaaagccggcatttcgtttggcaag
gatgacatgatcattccggacgccaaggaaccgctggtcggtggtacccacgacaaggtc
aaggaatacgagcagcagtaccaggacggtctcatcacccgtggtgagaaatacaacaag
gttgttgacgcctgggcgcagtgcaccgacgacgtttccgaagcgatgatgaaagtcatc
tcggcgacggcagaaggtgacaatgtgaactcggtttacatgatggcgcactccggtgct
cgtggttctgccgcccagatgcgtcagctggctgctatgcgtggcctgatggcgaaaccg
gacggctcgatcatcgagaccccgattatttcgaactttaaagaaggcctgaccgtgcag
gagtacttcaactccacccacggtgctcgtaaaggtctggctgataccgcactgaaaacg
gcgaactcgggttaccttacccgtcgtctggttgacgtggcccaggactgcatcatcacc
cagcatgattgcggtacggatcgtggcctcgacatcgcagccgtcgtcgattccggtgag
gttatcgaaaccctgtctgatcgtatcctcggtcgtttcaccgccgacgagatcgttgat
ccgtcgaccggcgaagtcatcgtgccgaagaacgagatggttgaagaagatcacctcgat
ctcatcgagaaagccggtgttgaaaccgcacgtatccgttcggttctgacctgtgacgcc
gaaaccggtgtttgcggccattgctatggtcgtgacctggcacgcggtaccacggtgaac
atcggtgaagctgtcggtgttatcgccgcacagtcgatcggtgagccgggcacccagctg
accatgcgtacgttccacattggtggtgcggcacagcgtggtgcagaggtctccggtgtc
gaagcgaacttcgatgcaaccgtgaaactgaaaaaccgtgcggtcgttgagaactcggca
ggcgtcaacatcgtgatggcgcgtaacctcgagattctcctgatcgacaaaaccggtcgc
gagcgtgcgaaatatcgcgttccgtacggtgcaaaacttctcaccgatgaaggtgcacag
gtcacgcgtggtcagaaactggccgagtgggatccgtacaccctgccgatcatcaccgag
aaagaaggttatgtgaactatgtcgaccttctcgagaacgtaaccattcgcgaagtctat
gacgaagcgaccggtattgcctcgaaaacggttatcgactggaagagcatgcccaaggcg
tccgaccttaagccgcgcgttaccctgcgtaacgaagccggcgaggtcatcaacctggat
aacggtcttgaagcccgttacttcctgtcggttgacgctattctctcggtcgagaacggt
cagaaagttcatgctggtgacgtgcttgcacgtatcccgcgcgaaggttcgaagacccgt
gacatcaccggtggtctgccgcgtgttgccgagctgttcgaagcccgtaaaccgaaagaa
cacgcaatcatctcggatattccgggtcgcgtcgaattcggcaaggactacaagaacaag
cgccgtgtcatcgttcacccgctcgaggattcgggcctgaccgaaccggtcgaatacctg
atcccgaaaggcaagcatcttgccgttcaggaaggggacttcgtcgagaagggcgatcag
ctccttgatggttcgccggttccgcacgatatcctgcgcgtcatgggcgtcccggcactg
gcagattacctggtcaacgagatccaggaagtctaccgtctgcagggcgtgaagattaac
gacaagcatatcgaagtcatcgttcgccagatgcttcagaaagtcgaaatcaccaaaccg
ggtgacacgactcttctggttggtgaaatcattgaccgcgttgacttcgatgccgaaaac
gagcgtgcgcttaaagaaggcggcgaactcgcagaaggtgcaccggtcctccaggggatc
accaaggcatccctgcagacgcattccttcatctcggccgcgtcgttccaggaaaccacg
cgcgttcttaccgaagcagccgtttcgggcaagaccgatacccttatcggtctgaaagag
aacgtcatcgtgggtcgtttgatcccggctggtaccggtgcggtgatgaaccgcttccgt
gcactggctgccgaacgcgacaaatcggtacagatcgaggcagaagaagaaatcggcgac
aatttcggtccgcaggccgatgccgacaccgcttcactgccggcaggcgaataa
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