Thalassospira sp. GO-4: M9H61_01280
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Entry
M9H61_01280 CDS
T10246
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M9H61_01280 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thgo01007
]
M9H61_01280 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thgo03016
]
M9H61_01280 (aspS)
03029 Mitochondrial biogenesis [BR:
thgo03029
]
M9H61_01280 (aspS)
Enzymes [BR:
thgo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
M9H61_01280 (aspS)
Amino acid related enzymes [BR:
thgo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
M9H61_01280 (aspS)
Transfer RNA biogenesis [BR:
thgo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
M9H61_01280 (aspS)
Prokaryotic type
Other AARSs
M9H61_01280 (aspS)
Mitochondrial biogenesis [BR:
thgo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
M9H61_01280 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
URK18167
LinkDB
All DBs
Position
252439..254226
Genome browser
AA seq
595 aa
AA seq
DB search
MHPYRSHNCNALRATDADAEVRLSGWIHRKRDHGNLLFVDLRDHYGITQVVIDISSPLFE
TLDKARAESVITVDGKVVKRTAETINPNLPTGEIEVYASNVEVQSSAEVLPMPVFGDVEY
GEEIRLRHRYLDLRRESVHSNIVLRSKVISAMRQKMTAQGFLEIQTPILTASSPEGARDF
LVPSRMHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MAFATQEDVFAAIEPVLYEIFVEFGGGRDVTPFPFPRIPFDESMAKYGSDKPDLRNPLII
SDVTEPFRGSSFGIFASNIEKGSVVRAIPATGAAARPRSFFDKLNSWARDEGAAGLGYIV
YGEDGEAKGPIAKNLDADRIAQIKEITGVANGDAVFFVCDKALAAAKFAGKVRDKVCDEL
ELREEGMFKFCWIVDFPMYEEDDDGKIEFSHNPFSMPQGGLEALETMNPLDIKAWQYDIV
CNGIELSSGAIRNHRPDIMYRAFEIAGYGKDVVEEQFGGMLNAFKFGAPPHGGSAPGVDR
IVMLLADEPNIREVIAFPLNQQAQDLMMNAPSNVEDKQLKELHLRVQMPPKAKKD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttatcgctcacacaattgtaatgcgctgcgcgcgactgacgcagatgcggaa
gttcgtctgtctggctggattcaccgtaagcgtgaccacggcaaccttctgtttgttgac
ctgcgcgaccattacggcatcacccaggtcgtgatcgacatttccagcccgctgtttgaa
acgcttgataaagcgcgcgccgaaagcgtgatcacggtggatggcaaggttgtcaaacgt
accgcagaaaccatcaacccgaatctgccgaccggcgaaatcgaagtttacgcatcgaat
gtcgaagttcagtcttcggccgaagtgttgccgatgccggtctttggcgatgtcgaatat
ggcgaggaaatccgcctgcgtcaccgttatctcgacctgcgtcgtgaaagcgtgcattcc
aacatcgttctgcgttccaaagtcatttcggccatgcgccagaaaatgaccgcacagggc
ttcctggaaatccagaccccgatcctgacggcaagttcgccggaaggcgcgcgtgacttc
ctggtgccgtcgcgcatgcatccgggcaagttctatgccctgccgcaggccccgcagcag
ttcaaacagcttctgatggtttcgggctttgaccgttacttccagatcgcaccgtgcttc
cgtgatgaagacgcccgtgccgaccgttcgccgggcgagttttatcagctcgacttcgag
atggcctttgccacccaggaagacgtgtttgccgcgattgagccggttctgtacgaaatc
tttgtcgagttcggcggtggtcgcgatgtgaccccgttcccgttcccgcgtattccgttt
gatgaatcgatggcgaaatacggttcggacaagccggacctgcgcaacccgctgatcatt
tccgatgtgaccgagccgttccgtggttcgagctttggcatctttgcgtcgaacatcgaa
aaaggttcggtcgttcgtgccattccggcaaccggtgccgcagcacgtccgcgcagcttc
tttgacaagcttaattcgtgggcacgtgatgaaggtgcggctggtcttggctatatcgtt
tatggcgaagacggcgaagcaaaaggcccgattgccaagaaccttgacgctgaccgtatc
gcccagatcaaggaaattaccggtgttgccaatggcgacgcggtcttctttgtctgtgac
aaggcactggcagccgccaaattcgccggcaaggtccgtgacaaggtctgtgacgaactt
gaactgcgtgaagaaggcatgttcaaattctgctggatcgttgatttcccgatgtatgag
gaagacgacgacggcaagatcgaattcagccacaacccgttctcgatgccgcagggtggt
cttgaagcacttgagaccatgaacccgctcgatatcaaggcgtggcagtatgacatcgtc
tgtaacggtatcgaactgtcgtcgggtgccattcgtaaccatcgcccggacatcatgtat
cgtgcgttcgaaatcgccggttacggcaaggatgttgtcgaagaacagttcggtggcatg
cttaacgcattcaaattcggcgccccgccgcacggtggttccgcaccgggtgttgaccgt
atcgtcatgctgctggcagacgagccgaacattcgtgaagtcattgccttcccgctgaac
cagcaggcgcaggaccttatgatgaatgcgccgtcgaatgtcgaagacaagcagctcaag
gaactgcatctgcgtgtccagatgccgccgaaggcgaaaaaagactga
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