Thalassospira sp. GO-4: M9H61_04645
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Entry
M9H61_04645 CDS
T10246
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9H61_04645 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thgo03019
]
M9H61_04645 (recQ)
03400 DNA repair and recombination proteins [BR:
thgo03400
]
M9H61_04645 (recQ)
Enzymes [BR:
thgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9H61_04645 (recQ)
Messenger RNA biogenesis [BR:
thgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M9H61_04645 (recQ)
DNA repair and recombination proteins [BR:
thgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M9H61_04645 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
URK18800
LinkDB
All DBs
Position
962695..964527
Genome browser
AA seq
610 aa
AA seq
DB search
MNDLLDRPVQRLPIDVLREVFGYDSFRGQQAEIIDHVIAGNDALVLMPTGGGKSLCYQVP
ALCRSGTAVVVSPLIALMKDQVDALNQLGVKAAFINSTLAPEAAREIEARAVDGDIDLLY
VAPERFATDRFLNLLDRISISLFAIDEAHCVSQWGHDFRPEYRRLDLLPTRFAHVPRIAL
TATADTPTRKDIAENLHLTDAKCFITGFDRPNITYRIETKGNAKQRLLSFLNREHAEDAG
IVYCLSRRKTEDVAQWLTDNGRPALPYHAGLTQETRQLHQDRFLREDGMIICATVAFGMG
IDKPNVRFVAHLNLPKSMEAYYQETGRAGRDGLPANAWMNYDLSDIVSIRSMVASSDAPE
AQKRIESRKLDALVGLAETTKCRRQVILSYFGEDQHQPCGNCDTCLEPVETWDATDASRK
ALSAVYRTGQRFGPAHVIEVLMGRKTEKIRQNGHDQLSVYAIGKDIPQPQWRSVFRQLLA
MGYLQVDVEGHGGVYLTEESRPVLRGEKVVEMRKDPGESKRAMTRRLRDFDTEFENEEDR
DLWERLRTMRRELATSQNVPPYVIFSDRTLWEMVRFKPRTLEDMASINGVGVKKLDQYGL
AFLDVMDGRR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgctcgaccgacccgtacaacgtctgccgatagacgtcctgcgcgaggta
ttcggttatgacagttttcgcggccagcaggctgaaatcattgatcatgtgattgctggc
aatgatgcgctggtactgatgcccaccggtggcggcaaatcattatgctatcaggtccct
gccctgtgccgttcgggtaccgctgttgtggtgtcaccactgatcgcgcttatgaaggat
caggtcgacgcccttaatcagcttggcgtcaaggcggcctttatcaattcgaccctggcc
ccggaagccgcccgcgagatcgaggcccgcgccgttgatggcgatattgatcttctttat
gtcgcaccggaacgttttgcgaccgaccggttccttaatctgcttgatcgcatcagcatt
tccttgtttgcgattgacgaagcacactgcgtttcgcaatgggggcatgatttccgcccg
gaataccgtcggcttgatcttttgccgacgcgctttgcccatgtaccgcgcatcgccctt
accgcgactgccgatacaccgacccgcaaggacattgccgaaaacctgcatctgaccgat
gccaaatgcttcattaccggctttgaccgtcccaatatcacctatcgcattgaaaccaag
ggcaacgccaagcagcgcctgctgtcgttcctcaatcgtgaacatgccgaagatgccggg
attgtctattgcctgtcacgccgcaagaccgaagatgtcgcgcaatggctaaccgataac
ggtcgccctgccttgccctatcatgcgggcctgacacaggaaacgcgccagctccatcag
gatcgcttcctgcgtgaagatggcatgatcatttgtgcgactgtggcctttggcatgggc
atcgacaaacccaacgtgcgctttgttgcgcatttgaacctgcccaaaagcatggaagcc
tattatcaggaaaccgggcgtgcaggccgtgacggacttccagccaatgcctggatgaat
tacgacctttcagacatcgtttcgatccgcagcatggtggcaagttccgacgcgcccgaa
gcccagaaacgcattgaatcgcgcaagcttgatgcgctggtcggacttgcagaaaccacc
aaatgccgtcgccaggtcatcctgtcctattttggcgaagatcaacatcagccctgtggc
aattgcgatacctgtcttgagccggttgaaacatgggatgccaccgatgcgtctcgcaag
gcgctttcagcggtctatcggacaggtcaacggtttggcccggcccatgtgatcgaagtt
ctgatgggccgcaaaaccgaaaaaattcgccagaacggccatgatcagctctcggtttat
gcaattggcaaggatatcccacaaccgcaatggcgatcggttttccgtcagcttcttgcc
atgggatatttgcaggtcgatgtcgaagggcatggcggtgtttacctgaccgaggaatca
cggccggtcctgcgcggtgaaaaagttgtcgaaatgcgcaaggacccgggcgaaagcaaa
cgcgccatgacgcggcgcctgcgcgatttcgataccgaatttgaaaacgaggaagaccgc
gatctttgggaacggttgcgtaccatgcgccgcgaattggccaccagccagaatgtcccg
ccctatgtcatcttcagcgaccggacactttgggaaatggtgcgtttcaaaccccgcaca
ctcgaagacatggcgtccattaacggcgttggggtcaagaaactagatcagtatgggctg
gcgtttcttgatgtgatggacgggcggcgctaa
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