Thalassospira sp. GO-4: M9H61_04900
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Entry
M9H61_04900 CDS
T10246
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo03030
DNA replication
thgo03430
Mismatch repair
thgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9H61_04900 (dnaE)
03430 Mismatch repair
M9H61_04900 (dnaE)
03440 Homologous recombination
M9H61_04900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thgo03032
]
M9H61_04900 (dnaE)
03400 DNA repair and recombination proteins [BR:
thgo03400
]
M9H61_04900 (dnaE)
Enzymes [BR:
thgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9H61_04900 (dnaE)
DNA replication proteins [BR:
thgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9H61_04900 (dnaE)
DNA repair and recombination proteins [BR:
thgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9H61_04900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
URK18849
LinkDB
All DBs
Position
complement(1017220..1020705)
Genome browser
AA seq
1161 aa
AA seq
DB search
MENGFVHLRVHTNYSLAEGAITTKELAKLCAADGQPAVAMTDTDNMFGALDFAGVLSGGG
VQPILGVQMGVERFGDKPAVGKIAREPMPDRLVLIAQNKEGYFNLLKIVSRAHMTSEAGS
EPKALYDHIRKYSGHIICLTGGPTGPLARLLADEQVEKAEECLAQLKDIFGNRLYIELQR
HGEELEDLVEPGLIKLAYDHDVPLVATNNCYFPSADMYEAHDVFICIGQGAVVGQEDRWK
LTPDHRFKTAAEMRELFADIPEACDNTLLIAKRCSWHVEKIDPILPPFDCGEGRTEVDEL
RHMSEEGLKGRLEKYVFTEDMSDAEKEEIAKPYWERLDYELGIINQMGFPGYFLIVADFI
QWAKDHDIPVGPGRGSGAGSLVAYALLITDLDPLRFSLLFERFLNPERVSMPDFDVDFCQ
DRRGEVIEYVQKKYGHDRVAQIITFGKLQAKAAVRDVGRVLSIPYGYVDKICKMIPGDPA
KPIPLKEGIDMEPDLRRIAREDPDIDRLLSIAMQIEGLYRNSSTHAAGVVIGDRDLDALV
PLYRDPRSDMPVTQFNMKFVENAGLVKFDFLGLKTLTVIIEAVNLMRQRKDVPQNFDIGA
IPLDDRAAFKLLSAAETVGVFQLESQGMQDVLRGLKPDTLEDIIAVVALYRPGPMDNIPH
YIARKHGQEEPDYMHPMLQPILEETYGIMIYQEQVMQLAQIMAGYSLGGADLLRRAMGKK
IAEEMEKQRGLFVDGSEKNGVDRAQASDIFDQVAKFASYGFNKSHAAAYALVAYQTAYLK
ANYPVEFMAALMTLDMHNTEKLAVFKQEVERLEIEILPPCVNNSQVAFSVENHDGVRKIR
YALAAVRNVGDAAMESLVAEREANGPFKDITDFASRIDSRAVNKRLLENLVRAGALDCLT
PNRKVMFENVDKVIAVAQREMQARNDDQISMFGDSSGFGKDKIRLPDDRDWVPMEKLTEE
FSAIGFYLSAHPLDTFGKSIQRIGIAPIKELPARMRAQNKGAIRLAGTLINAREMISKKN
GSKFAFVMFSDPTGSFEVAFWAEAWAAYKEIINAGRPVLLIVAAEMREGQLRIQGQRVED
LEQAVAGAAEGIRIRLNRPDPVPEICQLLADAGKGRGLVTLSSVCDDGRMAEIELEDKYK
VGPSLIGAIGAIPGVEFAEEI
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggtttcgtccatcttcgtgttcacaccaactattcgcttgccgaaggtgcc
atcacgacgaaggagcttgccaaactttgtgcagccgatggccagcccgccgttgcgatg
accgataccgacaatatgttcggtgctcttgactttgccggcgtactgagtggtggtggc
gtgcagccgatcctgggtgtccagatgggggtcgagcggtttggtgataaaccggccgtt
ggcaaaattgcccgtgaaccgatgcccgatcgactggtgctgattgcccagaacaaggaa
ggttatttcaatcttctgaaaatcgtgtcacgcgcccatatgacgtccgaagccgggagc
gagcccaaggcgctttatgaccatattcggaaatattccggacatatcatctgtttgaca
ggcggcccgactggtccgctggcccgcttgctggccgatgaacaggttgaaaaggccgaa
gaatgtcttgcgcagctcaaggatatttttggcaaccggctttatatcgaactgcaacgc
catggcgaggaactggaagacctggtggaaccggggctgatcaagcttgcctatgatcat
gatgttccactggttgcgaccaataactgctacttcccgtcggcagatatgtatgaagcc
cacgacgtcttcatctgtatcgggcagggggcggttgtcggccaggaagatcgctggaaa
ctgacgcccgatcatcggtttaaaaccgcagcagaaatgcgcgaactgtttgccgatatt
cccgaagcctgtgacaacacacttctgatcgccaaacgctgttcctggcatgtcgaaaaa
attgacccgatcttgccgccatttgattgcggtgaaggccggacagaggtcgacgaactg
cgtcacatgtcagaggaagggttgaaaggccgccttgaaaaatatgtctttaccgaagac
atgtcggatgccgaaaaagaagaaatcgccaaaccgtattgggaacgtctggattatgag
ctgggcatcatcaaccagatggggttcccgggttacttcctgatcgttgccgactttatc
cagtgggcgaaggatcatgacattccggtcggaccgggtcgtggttcgggtgccggttcg
ctggttgcatatgcgcttttgattaccgaccttgatcctttgcggttctcgttgctgttc
gaacgtttccttaatccggaacgtgtgtccatgcccgactttgacgtcgatttctgtcag
gaccggcgcggcgaagttatcgaatatgtgcaaaagaaatatggccatgaccgcgtggcc
cagatcatcacattcggtaagttgcaggcaaaggcagccgtgcgcgacgtcgggcgtgtg
ttgagcatcccgtatggttatgtcgataaaatctgtaaaatgatcccgggcgacccggcc
aaaccgatcccgcttaaggaagggatcgatatggaaccggatttgcggcgtattgcgcgc
gaagacccggacattgaccgactgctgtcgatcgccatgcagatcgaaggtctttatcgt
aactcctcgactcatgccgccggtgttgtgattggtgaccgcgatcttgacgcgctggtc
ccgctttatcgtgatccgcgctcggacatgccggtaacccagttcaacatgaagtttgtt
gaaaatgccggtctggtgaagttcgacttcctgggtcttaagacgctgacggtgattatc
gaggccgtcaacctgatgcgtcagcgcaaggatgtcccgcaaaactttgatatcggggct
attccgcttgatgatcgtgcggcgttcaagcttttgtctgcagccgaaacggttggcgtg
ttccagcttgaatcccaggggatgcaggacgtgttgcgcggcctgaagccagatacgcta
gaagacattatcgctgttgtggccctgtatcgtccggggccgatggataacattccccat
tacatcgcgcgtaagcacggtcaggaagaacctgactatatgcacccgatgttgcagccg
atcctcgaagaaacctatggcatcatgatctatcaggagcaggtcatgcagcttgcccag
atcatggcgggttattcgcttggtggtgctgacctgttgcgtcgcgcaatgggtaagaaa
attgccgaagaaatggaaaaacagcgcgggctgtttgttgatggttccgaaaagaacggc
gtcgatcgtgcccaggcgtctgatatctttgatcaggtcgcaaagttcgcatcctacggc
tttaacaaatcgcacgcggcggcctatgcgctcgtggcgtatcagactgcctatctgaag
gcgaactatccggtcgagttcatggctgctctcatgacgctcgatatgcataacaccgaa
aaactggcggtgttcaagcaggaggtcgaacggcttgagatcgaaattctgccaccatgt
gtcaataattcccaggtggcgttttcggttgaaaaccatgacggggttcgcaaaatccga
tacgcgctggcggcggttcgaaatgtcggtgatgcggcgatggaaagccttgtcgccgaa
cgcgaagccaacggtccgttcaaggacattaccgatttcgcatcacgcatcgacagtcgc
gctgtcaacaaacgtctgcttgaaaaccttgtgcgggcaggggcgcttgattgtctgacg
cccaaccgcaaggtcatgtttgaaaatgtcgataaggtgattgccgtcgcgcagcgtgaa
atgcaggcgcgcaatgatgatcagatttcgatgtttggtgacagcagcggctttggcaag
gacaagatccgcctgcctgatgatcgtgactgggtgccgatggaaaaactgaccgaggaa
ttttccgccatcggtttctatctgtcagcacatccgcttgatacatttggcaaaagcatc
cagcggatcggtattgccccgatcaaggaactgcccgcgcgcatgcgtgcccagaacaag
ggcgccattcgtcttgccgggacattgatcaatgcgcgtgaaatgatttcaaaaaagaac
gggtcaaagtttgcctttgtcatgttctcggacccgaccggaagcttcgaggttgccttc
tgggcagaagcatgggcggcttataaggaaatcatcaatgcggggcggcctgttctgttg
attgtggcagcggaaatgcgcgaaggacagctgcgcatccagggacagcgcgttgaggat
cttgaacaggctgttgctggcgcggccgagggtattcgtattcgcctcaatcgtcctgac
cccgtaccggaaatttgtcagcttcttgccgatgccggcaagggacgggggctcgtgacg
ctttcatctgtctgcgatgacggtcgcatggccgaaattgaacttgaagacaaatacaag
gtcgggccgtcgctgattggtgcgattggcgcaattccgggtgtggaattcgccgaagaa
atctga
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