Thalassospira sp. GO-4: M9H61_09350
Help
Entry
M9H61_09350 CDS
T10246
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo02010
ABC transporters
thgo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M9H61_09350 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M9H61_09350 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thgo02000
]
M9H61_09350 (lsrB)
Transporters [BR:
thgo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
M9H61_09350 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
URK19693
LinkDB
All DBs
Position
1989179..1990204
Genome browser
AA seq
341 aa
AA seq
DB search
MSGRTLKLMSAAAIAGSLLAAAPAFAENQIAFIPKLVGVGFFTSGGNGATTAGKELGIDV
TYDGPTEPSVSGQVQFVNNFVNQGYNSIILSSVSPDGLCPALQRAMKRDVLVMTWDSDVK
PECRSYYINQGTPEQLGGLLVDMANDGVKKEKAKVAFFYSSPTVTDQNAWANAAKAKIAA
EHPGWEIVTTQYGYNDAQKSLQTAESILKAYPDLDAIIAPDANALPASAQAAENLDRAGK
VTIVGFSTPNVMRPYVKRGTVERFGLWDVTEQGKISVFVANHVLDNGPMNVGDKLDIPGV
GTVEVSPNSVQGYEYEAEGNGIILLPHRTVFTKDNIDNFDF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaacgttaaaactgatgtcagccgcggccattgccggctcgcttctggca
gcagcaccggcatttgccgaaaaccagatcgccttcattccgaaacttgtcggtgtcggc
ttctttaccagtggcggcaatggtgccaccaccgctggcaaggaactgggcattgatgtg
acctatgatggcccgaccgaaccaagcgtttccggtcaggtccagttcgtgaacaacttc
gtgaaccagggttacaactcgatcattctgtcgtcggtttccccggatggtctttgcccg
gccctgcagcgcgccatgaagcgcgacgttctggtcatgacctgggacagtgatgtcaaa
ccggaatgccgttcgtactatatcaaccagggaaccccggaacagcttggcggtcttctt
gtcgatatggcaaatgacggcgtgaaaaaggaaaaggcaaaagttgccttcttctattcc
agcccgaccgtgaccgaccagaatgcctgggccaatgccgccaaggccaaaattgctgct
gaacatccgggctgggaaatcgttaccacccagtatggctataacgatgcgcagaaatcc
cttcagactgccgaaagcatcctgaaagcctatccggatcttgatgccatcatcgccccg
gatgccaacgcccttccggcatcggcacaggctgccgagaaccttgaccgcgctggcaag
gtaaccattgtcggcttctcgaccccgaacgtgatgcgtccttatgtcaaacgcggcacg
gttgagcgtttcggcctttgggacgtcaccgaacagggcaaaatttcggtctttgttgcc
aaccacgttcttgataacggcccgatgaatgttggcgacaagctcgacattccgggtgtc
ggcaccgtcgaagtttccccgaacagtgttcagggttacgagtacgaagccgaaggtaac
ggcatcatcctgctgccgcaccgcaccgtctttaccaaagacaatatcgacaatttcgat
ttctga
DBGET
integrated database retrieval system
