KEGG   Thalassospira sp. GO-4: M9H61_12865
Entry
M9H61_12865       CDS       T10246                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
thgo  Thalassospira sp. GO-4
Pathway
thgo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:thgo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M9H61_12865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:thgo02022]
    M9H61_12865
Two-component system [BR:thgo02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   M9H61_12865
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA AAA_2 AAA_19 AAA_22 AAA_16 AAA_RNF213_3 AAA_3 AAA_7
Other DBs
NCBI-ProteinID: URK19978
LinkDB
Position
2777174..2778499
AA seq 441 aa
MRMALSQWLELSDFDVTVYEDAREALRDIRPDFAGVILTDVKMPKLDGITFTRSVLSADS
DIPVILMTGHGDVPMAVEAMKSGAYDFVEKPFEPKDIVESLERAIEKRRLVLENRKLRQQ
IAQRGSLDSRLIGNSLPMRALKDEIANIAPTEVPVLISGETGTGKELVARAIHDLSDRRD
EKFVAVNCAAIPESTAESELFGHEKGAFTGAVSQRVGWIEHAIGGTLFLDEISSMPLALQ
AKLLRVIEQREVVRVGSNAPVKVDFRLICATNEDLVEAVSARKFREDLLFRINTFELAIA
PLRDRKDDVALLFDIFAERAAERFERPYERLGPVLIGQLKSHDWSGNVRELKNMAERYVL
LVGSPEERFKRLFKAGFEKTSRLPGDLALADQLRDFEERVIRDALDRHDGNIKSVMEELD
IPRRTLNEKMKKLNIRREKPV
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcgcatggcgctgtcgcaatggctggaactgtctgatttcgatgtcaccgtctatgag
gacgcccgcgaagccctgcgcgatatccgcccggattttgccggggtcatcctgaccgat
gtgaagatgcccaaactcgatggcatcacctttacccgctcggtgctgtcagccgattcc
gatattcccgtcatcctgatgaccgggcacggcgatgtccccatggcagtcgaggccatg
aaaagcggcgcctatgactttgttgaaaaaccgttcgaacccaaagacattgtcgaaagc
ctcgaacgtgccatcgaaaagcgtcggctggttctggaaaaccgcaagctgcgccaacag
atcgcccagcgcggcagtctggacagtcgcctgatcggcaactctttgccgatgcgcgcc
cttaaggatgaaattgccaatatcgcaccgaccgaagtcccggtcctgatttccggcgaa
accggcaccggcaaggaactggtcgcgcgcgccatccatgatctgagcgaccggcgcgac
gaaaaattcgtcgcagtcaactgtgccgccattcccgaaagcactgctgaaagcgaactt
ttcggccacgaaaagggtgccttcaccggggcggtcagtcagcgggtaggctggatcgaa
catgcaatcggcggcacgcttttccttgacgagatttcaagcatgccgcttgcccttcag
gccaaattgctgcgcgtgatcgaacagcgcgaagtcgttcgcgttggctcaaacgccccg
gtaaaggtcgatttccggctaatctgtgccaccaacgaagatctggtcgaagccgtctca
gcacggaaattccgcgaagatctgctgtttcgcatcaatacttttgaactggccatcgcc
cccttgcgtgatcgcaaggatgatgtggccctgctgtttgatatttttgccgaacgcgcc
gccgaacggtttgaacgcccctatgaacgtctggggccggtcctgatcgggcaacttaaa
tcccatgactggtcgggcaatgtccgcgaattgaaaaacatggccgaacgctatgtcctt
ctggtcggaagccctgaggaaaggttcaagcgcctgttcaaggccggatttgagaaaaca
tcacgattgcccggtgaccttgccctggccgatcagctgcgcgatttcgaagaacgcgtt
atccgcgatgcccttgatcgccatgacggcaatatcaagtcggtgatggaagaactcgac
atcccccgccggaccctgaacgagaagatgaaaaagctcaatatccgccgcgaaaagccg
gtctga

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