Thalassospira sp. GO-4: M9H61_13265
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Entry
M9H61_13265 CDS
T10246
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
thgo Thalassospira sp. GO-4
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thgo03032
]
M9H61_13265 (ihfB)
03036 Chromosome and associated proteins [BR:
thgo03036
]
M9H61_13265 (ihfB)
03400 DNA repair and recombination proteins [BR:
thgo03400
]
M9H61_13265 (ihfB)
DNA replication proteins [BR:
thgo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M9H61_13265 (ihfB)
Chromosome and associated proteins [BR:
thgo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
M9H61_13265 (ihfB)
DNA repair and recombination proteins [BR:
thgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
M9H61_13265 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
TPPII
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
URK16514
LinkDB
All DBs
Position
complement(2876810..2877085)
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AA seq
91 aa
AA seq
DB search
MTKSELIARLAELNPHLYQRDVERIVATIFDEITDALARGDRVELRGFGAFSVKQRDARV
GRNPRTGDAVPVGEKKVPYFKTGKQLRERLN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgaattgattgcccggcttgctgaattgaatccgcatctctatcagcga
gacgtcgaacggattgttgcaacgatttttgacgaaatcactgacgcgcttgcccgtggc
gaccgggtcgaactgcgcggttttggtgcattttccgtcaaacagcgtgatgcccgcgtc
gggcggaacccgcgtaccggtgacgcggtccctgttggtgagaaaaaggttccctatttc
aaaaccggcaagcagctccgtgaacgtctgaactga
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