Thalassospira sp. GO-4: M9H61_14215
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Entry
M9H61_14215 CDS
T10246
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9H61_14215 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thgo03021
]
M9H61_14215 (rho)
03019 Messenger RNA biogenesis [BR:
thgo03019
]
M9H61_14215 (rho)
Transcription machinery [BR:
thgo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
M9H61_14215 (rho)
Messenger RNA biogenesis [BR:
thgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9H61_14215 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
Spore_III_AA
AAA_14
Mor
Motif
Other DBs
NCBI-ProteinID:
URK16698
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All DBs
Position
3065841..3067103
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AA seq
420 aa
AA seq
DB search
MHLQELKKKSPTELLALSEELEIENASTLRKQELMFAILKQLAENDHAIFGEGVLEVLPD
GFGFLRSPEANYLAGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKEGERYFALLKVDKVN
FDAPEKVRHRINFDNLTPLYPDQPLRMERESDQEGNKDTTNRVIELVSPLGKGQRALIVA
PPRTGKTVMLQNIAHAIEENHPEAYLIVLLIDERPEEVTDMDRSVKGEVISSTFDEPAQR
HVQVTEMVLEKAKRLVEHKHDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPK
RFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVLDRKLSDKRIFPAI
DILKSGTRKEELLVDKGVLSKMWVLRRILNPMGPQDAMEFLLGKLKSTKNNDDFFDSMNG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcaggaactcaaaaagaaatctccgaccgagctgcttgccctgtctgaggaa
ctcgaaatcgaaaatgccagcacgctccgcaaacaggagctgatgtttgccattctcaaa
cagttggccgagaacgaccatgccatttttggcgagggggttctcgaagtgctgcccgat
ggtttcggcttcttgcgtagccccgaggcaaactatcttgccgggcccgatgacatttat
gtcagcccaagccaggttcgccgttttggtctgcggaccggtgatacggtcgaaggccag
atccgttcgcccaaggaaggggaacgctatttcgcgttgctcaaggtcgacaaggtcaac
tttgatgcaccggaaaaagtccgtcatcgcatcaactttgacaacctgaccccgctttat
cctgatcagccgttgcgcatggaacgtgaatccgatcaggaaggcaacaaggacaccacc
aaccgcgtgatcgaactggtatcaccgcttggtaaaggtcagcgtgccctgatcgtcgca
ccgccgcgtaccggtaagaccgtgatgctgcaaaatattgcgcacgcgatcgaggaaaac
catccggaagcctatctgatcgttcttctgattgacgaacgcccggaagaagtgaccgac
atggaccgttcggtgaagggtgaagtcatcagctccacctttgacgaaccggcccagcgt
cacgttcaggtcaccgaaatggttctggaaaaggccaaacgtctggtcgaacacaagcat
gatgttgtcattctgcttgattccattacccgtctggcccgtgcctataacacggtcgtg
ccaagctcgggcaaggttctgaccggtggtgttgatgccaacgccctgcaacgtccgaaa
cggttctttggtgcggcccgtaacatcgaagaaggcgggtcgctgaccatcatcgcaact
gccctgatcgataccggttcacgcatggacgaggtcatctttgaagaattcaaagggacc
ggtaactccgaactggttctggatcgcaaactgtccgacaaacgtatcttcccggcgatt
gatatccttaaatcgggtacccgtaaggaagagctgcttgtcgacaagggcgttctgtcc
aagatgtgggtgctgcgccgtatcctcaacccgatggggccgcaggacgcgatggagttc
cttctgggcaaactcaaatcgaccaagaacaacgacgatttcttcgattccatgaatgga
taa
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