Thalassospira sp. GO-4: M9H61_14490
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Entry
M9H61_14490 CDS
T10246
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thgo Thalassospira sp. GO-4
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thgo03016
]
M9H61_14490
Enzymes [BR:
thgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M9H61_14490
Transfer RNA biogenesis [BR:
thgo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M9H61_14490
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
URK16750
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All DBs
Position
3125921..3126532
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AA seq
203 aa
AA seq
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MTNFLHLGDLPDDLDLGKVVAIDSETMGLNPHRDRLCVVQLSSGDGNAHLVKFDGEDYSA
PNLKKLLADPSVLKLFHFGRFDIAVMDKYLGVRCAPVYCTKIASKLIRTYTDRHGLKDLL
RELVGVEISKQQQSSDWGAAELTKEQIDYAASDVLYLHKAKEELDRRLAREGRTELAQAC
FDFLPTRATLDLSGWEETDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatttcctccatctcggagatctgccggacgatcttgaccttggcaaggtggtg
gcgatcgacagcgaaaccatgggcctgaacccgcaccgcgaccgtctgtgtgtcgtgcag
ctttcaagcggggatggcaatgcccatctggtcaagttcgatggagaagattacagcgcc
ccgaacctgaaaaaactgctggccgatccgtcggtcctgaaactgtttcatttcgggcgt
ttcgacattgcggtcatggacaaatatctcggtgtgcggtgcgcgccggtctattgcacc
aaaatcgcctccaaactgatccgtacctataccgaccgccatggtctgaaagaccttttg
cgcgaactggtcggggtcgagatttccaagcagcagcaaagttccgactggggggccgcc
gagcttaccaaggaacagatcgattatgcggcgtccgatgtgctgtatctgcacaaggcc
aaggaagagcttgatcgtcgtctggcccgtgaaggccgtaccgagctggcccaggcctgt
tttgacttcctgccgacccgtgcgacgcttgatctgtcgggttgggaagaaaccgatatt
tttgcccattaa
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