Thalassospira sp. GO-4: M9H61_14615
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Entry
M9H61_14615 CDS
T10246
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thgo Thalassospira sp. GO-4
Pathway
thgo03030
DNA replication
thgo03410
Base excision repair
thgo03420
Nucleotide excision repair
thgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9H61_14615 (polA)
03410 Base excision repair
M9H61_14615 (polA)
03420 Nucleotide excision repair
M9H61_14615 (polA)
03440 Homologous recombination
M9H61_14615 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thgo03032
]
M9H61_14615 (polA)
03400 DNA repair and recombination proteins [BR:
thgo03400
]
M9H61_14615 (polA)
Enzymes [BR:
thgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9H61_14615 (polA)
DNA replication proteins [BR:
thgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M9H61_14615 (polA)
DNA repair and recombination proteins [BR:
thgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M9H61_14615 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9H61_14615 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
URK16772
LinkDB
All DBs
Position
complement(3151130..3153949)
Genome browser
AA seq
939 aa
AA seq
DB search
MTESAPSNTNTSAGNPPRRVVLVDGSGFIFRAFHALPPMTSPDGTPVNAVYGFCTMLMKL
REDTKPDHMAVIFDTKGKSFRNDFYADYKAHRPPPPEELVPQFGLIRDATRAFNLPSIEL
EGYEADDLIATYARQAEAQGSDVIIVSSDKDLMQLVTDKVQMFDAMKNRTIGAAEVMEKF
GVAPDKVIDIQALAGDSVDNVPGVPGIGVKTAAQLIDEYGDLDSLLERAGEIKQPKRREK
LIENAELARISRDLVTLKTDVPVVEDLDDFDLKEPDPEVLLSFIASHGFKSLLSKVKAKF
GGDVEFESPTQPGIGVNDIKVEKAEYELVQDEERLKHWIAEAEYLGTVAVDTETTSLDAH
QAKLVGISLSTEPGNGCYIPLGHVSGEAQGGFDFGDTPEQSSDAPKQIKLERAIELLKPL
LEDPGVLKVGQNLKYDMIVLARHGIDVAPMDDTMVLSYVLDGTSHGHGMDELAELHLDYK
PIKFSDVCGSGKTQITFDQVPLDKALDYAAEDADITLRLHRLLKPRIAQEHMASVYETLD
RPLVPVLAKMESLGVKVDAEILKNLSDDFAKRMASLEVTIHEMAGEPFNLGSPKQLGEIL
FDKMSLPGGKKTKTGAWQTGADVLEALAAQGHDLPAKLLEWRQLSKLKSTYTDALANHIN
PQTGRVHTSYGQTNVNTGRLSSNDPNLQNIPIRSEEGRKIRTAFVAEPGHKLISADYSQI
ELRLLAHVAEIDALREAFKNGEDIHAATASKVFGVPIEGMDPMVRRKAKAINFGIIYGIS
AFGLANQLGIPQKEAKAFIDAYFEIYPGIRDYMDQAKEFATKHGFVRTLFGRHIHISGIN
DKNGMRRSFGERAAINAPIQGGAADIIKRAMIAVPGALLDAGLKTRMLLQVHDELIFEAP
EDEAEKAIKVIRDVMENAAHLSVPLIAEAGIGDSWADAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctgccccgtccaacaccaatacatccgccggcaatccgccgcgccgcgtc
gtactggttgacggttccggctttattttccgcgctttccatgccctgccgccgatgaca
agtcccgacgggaccccggtcaatgcggtatatggcttctgcaccatgttgatgaagctg
cgcgaagataccaagcccgaccatatggcagtcattttcgacaccaagggcaagtcattc
cgcaacgatttctatgccgactacaaggcccaccgcccgccgccccccgaagaactggta
ccgcaattcggtttgatccgggacgcgacccgcgcctttaacctgccctcgatcgagctc
gaaggctatgaggccgacgatctgatcgccacctatgcccgccaggccgaggcacagggt
tctgatgtgattatcgtgtcttcggacaaggacctgatgcaacttgttaccgacaaggtg
caaatgtttgatgcgatgaagaatcgcaccatcggggctgccgaagtcatggaaaaattc
ggcgtcgcgccggataaggtcattgatattcaggcacttgcgggcgattccgttgacaac
gtacccggcgtaccgggcattggtgtcaaaaccgccgcccaacttattgatgaatatggt
gatcttgattctctacttgagcgcgctggcgaaatcaaacagcccaagcgtcgcgaaaag
ctgatcgagaatgccgaacttgcccgcatttcacgcgatctggtgacccttaaaaccgac
gtgccggtggtcgaggaccttgatgatttcgacctgaaagaacccgatccggaagttctt
ttaagcttcatcgcaagtcacggctttaaatcactgctttctaaagtaaaagccaagttt
ggcggcgatgttgaatttgaaagcccgacccaacccggcattggtgtcaatgatatcaag
gtcgaaaaggccgaatatgaactggtgcaggatgaagaacgtctaaagcactggattgcg
gaggccgaatatcttggcaccgtggcggttgataccgaaaccacatcacttgatgcccat
caggccaaacttgtcggcatctcgctttcgaccgaaccgggcaatggctgctatatcccg
cttggccatgtcagcggcgaagcacagggtggctttgacttcggcgacacccccgaacaa
agcagcgacgcccccaagcagatcaagcttgaacgcgcgattgagcttctcaaacccctg
ctcgaagaccccggcgtgctcaaggtcggtcagaacctgaaatatgacatgatcgttctg
gcccgccatggcatcgatgtcgcaccgatggacgacaccatggttctgtcctatgtgctt
gacggaaccagccatggtcacggcatggacgagctggccgaactgcatcttgattataaa
ccgatcaagttttccgatgtttgcggatcgggcaaaacccagatcacctttgatcaggta
ccgctggacaaggcgctcgattacgcggccgaggatgcggatattacattgcgtctgcac
cgcctgctgaagccgcgcatcgcacaggaacatatggcaagtgtctatgaaacccttgat
cggccgctggtgccggttctggcaaagatggaaagcctgggcgtcaaggtcgatgccgaa
atcctgaaaaacctgtcggatgatttcgccaaacgcatggcaagtcttgaggttaccatc
catgaaatggctggagagccgttcaatcttggcagtcccaagcagctcggcgaaatcctg
tttgataaaatgagcctgccgggcggtaaaaagaccaaaaccggtgcctggcaaaccggg
gcagatgttctggaagccttggcagcacaggggcatgatcttccggccaagctgctggaa
tggcgtcagctttcgaaactcaaaagtacctataccgacgcgcttgccaaccatatcaac
ccgcaaactggtcgtgtgcacaccagttacggtcagaccaacgtcaataccgggcgtttg
tcatccaatgatccgaacctgcaaaacatcccgatccgaagcgaagaaggccgtaaaatc
cgtactgcctttgttgcagagcctggccacaagcttatttctgccgactattcgcagatc
gaattgcgtcttcttgcccatgtggccgaaatcgacgccctgcgcgaagccttcaaaaac
ggcgaggatatccacgccgcgaccgcatccaaggtctttggcgtgccaatcgaaggcatg
gatccgatggtccgccgcaaggccaaggcgatcaactttggcatcatttacggcatttcg
gcctttggtctggccaatcagcttggcattccgcaaaaagaggccaaggcctttatcgat
gcctatttcgagatttatccgggtattcgcgactatatggatcaggccaaggaatttgcc
accaaacatggttttgtccgtacgctgtttggtcgccatatccatatcagcggcatcaat
gacaaaaacggcatgcgcagaagctttggcgaacgtgcagcgatcaacgccccgattcag
ggcggtgctgccgacatcatcaaacgcgcgatgatcgcggtacccggtgcgctgcttgat
gccggcctcaagacccgcatgctgttgcaggtccacgatgaattgatctttgaagccccg
gaagacgaggccgaaaaagccatcaaggtcatccgtgacgtcatggaaaatgcggcccat
ctgtccgtaccgctgattgccgaagccggcatcggcgatagctgggcggatgcccactaa
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