KEGG   Thalassospira sp. GO-4: M9H61_14615
Entry
M9H61_14615       CDS       T10246                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
thgo  Thalassospira sp. GO-4
Pathway
thgo03030  DNA replication
thgo03410  Base excision repair
thgo03420  Nucleotide excision repair
thgo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M9H61_14615 (polA)
   03410 Base excision repair
    M9H61_14615 (polA)
   03420 Nucleotide excision repair
    M9H61_14615 (polA)
   03440 Homologous recombination
    M9H61_14615 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thgo03032]
    M9H61_14615 (polA)
   03400 DNA repair and recombination proteins [BR:thgo03400]
    M9H61_14615 (polA)
Enzymes [BR:thgo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M9H61_14615 (polA)
DNA replication proteins [BR:thgo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     M9H61_14615 (polA)
DNA repair and recombination proteins [BR:thgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     M9H61_14615 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M9H61_14615 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 Taq-exonuc NYN_YacP HHH_2
Other DBs
NCBI-ProteinID: URK16772
LinkDB
Position
complement(3151130..3153949)
AA seq 939 aa
MTESAPSNTNTSAGNPPRRVVLVDGSGFIFRAFHALPPMTSPDGTPVNAVYGFCTMLMKL
REDTKPDHMAVIFDTKGKSFRNDFYADYKAHRPPPPEELVPQFGLIRDATRAFNLPSIEL
EGYEADDLIATYARQAEAQGSDVIIVSSDKDLMQLVTDKVQMFDAMKNRTIGAAEVMEKF
GVAPDKVIDIQALAGDSVDNVPGVPGIGVKTAAQLIDEYGDLDSLLERAGEIKQPKRREK
LIENAELARISRDLVTLKTDVPVVEDLDDFDLKEPDPEVLLSFIASHGFKSLLSKVKAKF
GGDVEFESPTQPGIGVNDIKVEKAEYELVQDEERLKHWIAEAEYLGTVAVDTETTSLDAH
QAKLVGISLSTEPGNGCYIPLGHVSGEAQGGFDFGDTPEQSSDAPKQIKLERAIELLKPL
LEDPGVLKVGQNLKYDMIVLARHGIDVAPMDDTMVLSYVLDGTSHGHGMDELAELHLDYK
PIKFSDVCGSGKTQITFDQVPLDKALDYAAEDADITLRLHRLLKPRIAQEHMASVYETLD
RPLVPVLAKMESLGVKVDAEILKNLSDDFAKRMASLEVTIHEMAGEPFNLGSPKQLGEIL
FDKMSLPGGKKTKTGAWQTGADVLEALAAQGHDLPAKLLEWRQLSKLKSTYTDALANHIN
PQTGRVHTSYGQTNVNTGRLSSNDPNLQNIPIRSEEGRKIRTAFVAEPGHKLISADYSQI
ELRLLAHVAEIDALREAFKNGEDIHAATASKVFGVPIEGMDPMVRRKAKAINFGIIYGIS
AFGLANQLGIPQKEAKAFIDAYFEIYPGIRDYMDQAKEFATKHGFVRTLFGRHIHISGIN
DKNGMRRSFGERAAINAPIQGGAADIIKRAMIAVPGALLDAGLKTRMLLQVHDELIFEAP
EDEAEKAIKVIRDVMENAAHLSVPLIAEAGIGDSWADAH
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgactgaatctgccccgtccaacaccaatacatccgccggcaatccgccgcgccgcgtc
gtactggttgacggttccggctttattttccgcgctttccatgccctgccgccgatgaca
agtcccgacgggaccccggtcaatgcggtatatggcttctgcaccatgttgatgaagctg
cgcgaagataccaagcccgaccatatggcagtcattttcgacaccaagggcaagtcattc
cgcaacgatttctatgccgactacaaggcccaccgcccgccgccccccgaagaactggta
ccgcaattcggtttgatccgggacgcgacccgcgcctttaacctgccctcgatcgagctc
gaaggctatgaggccgacgatctgatcgccacctatgcccgccaggccgaggcacagggt
tctgatgtgattatcgtgtcttcggacaaggacctgatgcaacttgttaccgacaaggtg
caaatgtttgatgcgatgaagaatcgcaccatcggggctgccgaagtcatggaaaaattc
ggcgtcgcgccggataaggtcattgatattcaggcacttgcgggcgattccgttgacaac
gtacccggcgtaccgggcattggtgtcaaaaccgccgcccaacttattgatgaatatggt
gatcttgattctctacttgagcgcgctggcgaaatcaaacagcccaagcgtcgcgaaaag
ctgatcgagaatgccgaacttgcccgcatttcacgcgatctggtgacccttaaaaccgac
gtgccggtggtcgaggaccttgatgatttcgacctgaaagaacccgatccggaagttctt
ttaagcttcatcgcaagtcacggctttaaatcactgctttctaaagtaaaagccaagttt
ggcggcgatgttgaatttgaaagcccgacccaacccggcattggtgtcaatgatatcaag
gtcgaaaaggccgaatatgaactggtgcaggatgaagaacgtctaaagcactggattgcg
gaggccgaatatcttggcaccgtggcggttgataccgaaaccacatcacttgatgcccat
caggccaaacttgtcggcatctcgctttcgaccgaaccgggcaatggctgctatatcccg
cttggccatgtcagcggcgaagcacagggtggctttgacttcggcgacacccccgaacaa
agcagcgacgcccccaagcagatcaagcttgaacgcgcgattgagcttctcaaacccctg
ctcgaagaccccggcgtgctcaaggtcggtcagaacctgaaatatgacatgatcgttctg
gcccgccatggcatcgatgtcgcaccgatggacgacaccatggttctgtcctatgtgctt
gacggaaccagccatggtcacggcatggacgagctggccgaactgcatcttgattataaa
ccgatcaagttttccgatgtttgcggatcgggcaaaacccagatcacctttgatcaggta
ccgctggacaaggcgctcgattacgcggccgaggatgcggatattacattgcgtctgcac
cgcctgctgaagccgcgcatcgcacaggaacatatggcaagtgtctatgaaacccttgat
cggccgctggtgccggttctggcaaagatggaaagcctgggcgtcaaggtcgatgccgaa
atcctgaaaaacctgtcggatgatttcgccaaacgcatggcaagtcttgaggttaccatc
catgaaatggctggagagccgttcaatcttggcagtcccaagcagctcggcgaaatcctg
tttgataaaatgagcctgccgggcggtaaaaagaccaaaaccggtgcctggcaaaccggg
gcagatgttctggaagccttggcagcacaggggcatgatcttccggccaagctgctggaa
tggcgtcagctttcgaaactcaaaagtacctataccgacgcgcttgccaaccatatcaac
ccgcaaactggtcgtgtgcacaccagttacggtcagaccaacgtcaataccgggcgtttg
tcatccaatgatccgaacctgcaaaacatcccgatccgaagcgaagaaggccgtaaaatc
cgtactgcctttgttgcagagcctggccacaagcttatttctgccgactattcgcagatc
gaattgcgtcttcttgcccatgtggccgaaatcgacgccctgcgcgaagccttcaaaaac
ggcgaggatatccacgccgcgaccgcatccaaggtctttggcgtgccaatcgaaggcatg
gatccgatggtccgccgcaaggccaaggcgatcaactttggcatcatttacggcatttcg
gcctttggtctggccaatcagcttggcattccgcaaaaagaggccaaggcctttatcgat
gcctatttcgagatttatccgggtattcgcgactatatggatcaggccaaggaatttgcc
accaaacatggttttgtccgtacgctgtttggtcgccatatccatatcagcggcatcaat
gacaaaaacggcatgcgcagaagctttggcgaacgtgcagcgatcaacgccccgattcag
ggcggtgctgccgacatcatcaaacgcgcgatgatcgcggtacccggtgcgctgcttgat
gccggcctcaagacccgcatgctgttgcaggtccacgatgaattgatctttgaagccccg
gaagacgaggccgaaaaagccatcaaggtcatccgtgacgtcatggaaaatgcggcccat
ctgtccgtaccgctgattgccgaagccggcatcggcgatagctgggcggatgcccactaa

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