Thalassospira sp. GO-4: M9H61_18650
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Entry
M9H61_18650 CDS
T10246
Name
(GenBank) cadherin-like domain-containing protein
Organism
thgo Thalassospira sp. GO-4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
URK17546
LinkDB
All DBs
Position
complement(4089972..4094771)
Genome browser
AA seq
1599 aa
AA seq
DB search
MADIRDQGQVNTPKVQADDGQSLQVSLRQDTSLSSVHTGSRQWYDPRIEAAPDEGYTQSP
DISNSSENYNESVLQDGDSSVSNIELGGSGNNASSTKIVNNQAPIAGNGQEIIETNSPPL
QPVTQPDTGDTFGNGFGGGGGAGGTSGSGGSSAAARSVGGGGGGGGTTTIAGASADDAAA
GASGSDVLSVNDVEGAGGENLTLNINVFEDNSTSIYFILIQGMPDGATLSAGDNLGNGIW
QVSVDELDGLSVAITEETIGNYNVTVTVINTETGEVVDSESFELAANDGADAPTLSVDPA
SGNEDSAIALDITAGLTDADETLSVTISDIPAGSTLSAGTVNPDGTVTLTAGELAGLTIT
PPEDFSGSFDLTVTATSTEGSDTASVSETLAVTVDAQADAPTLSVDPASGNEDSAIALDI
TAGLTDADETLSVTISDIPAGSTLSAGTVNPDGTVTLTAGELAGLTITPPEDFNGSFDLT
VTATSSDGADTSSIADTLSVNVDPVADAPAVTIDIDPVIEENVPSDLTITLDPLEADVTA
EITVTGLPADATLSAGTQNPDGSWTLSEGDLAGLTLTVSTTVNISFTVDVTVTHTINGTT
DSTTQSATVDVVDAGALPSVTVSFDGAVLEDAATPLDISVAVESGESVVEVTVDGLPAGT
TLSAGTVNPDGSVTLTPGELAGLTLTPPDDYNGSLDFTVTAETTSGAGTETVTENVSTTV
EAVAGTPILTVNGASGAEDGGAITLDITAGVTDAGEGLEITISDIPAGSTLSAGTVNPDG
TVTLTAGELAGLTITPPEDFSGSFDLTVTATSSDGADTASIADTLSVTVDPVADAPTLSA
DPASGNEDSAIALDITAGLTDADETLSVTISDIPAGSTLSAGTVNPDGTVTLTAGELAGL
TITPPEDFSGSFDLTVTATSSDGADTASIADTLSVTVDPVADAPTLSVDPASGNEDSAIA
LDITAGLTDADETLSVTISDIPAGSTLSAGTVNPDGTVTLTAAELAGLTITPPADYYGSF
DLTVTATSVDGSDSASVSETLTVQVENVADGPELTLGLPALCLEDTACGLTIDVGVLAPS
EVLEVTIEGLPNDGTLSAGIKNPDGSWTLTQAELVGLTVTVLEPGDSLLTVTATVNDPIS
GTSDSTIANINLEVLNVAEGPTLNLGLPALCLEDTACGLTIDVGVLAPSEVLEVTIEGLP
NDGTLSAGIKNPDGSWTLTQTELVGLTVTVLEPGDSLLTVTATVNDPISGTSDSTIANIN
LEVLNVAEGPTLNLGLPALCLEDTACGLTIDVGVLAPSEVLEVTIEGLPNDATLSAGIKN
PDGSWTLTQAELVGLTVTVLEPGDSLLTVTATVNDPISGTSDSTIANINLEVLNVAEGPT
LNLGLPALCLEDTACGLTIDVGVLSPTEVLEVTIEGLPNDATLSAGIENPDGSWTLTQAE
LVGLTVTALEPGDSLLTVTATVSDPISGTSDSTIANINLEVLNIADAPTLDLSLSAAVIE
DSPTPLLITVSDLALTEDVTLTIDGVDNGATLNAGTLNPDGTYTLELLDLVGLAITPDTE
DDLQLSITATVEDSSSNTVATTTATLDIDVLPNPLDPLI
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatacgtgatcagggacaagtcaacacaccgaaagttcaggctgacgatggc
cagagccttcaggtgtctctgcgacaggatacctcgctttccagcgttcatacgggaagc
cgtcagtggtatgacccccgtatcgaagcggccccggatgaaggctacacgcagtcaccc
gatatttcgaactcctccgaaaactacaatgaatctgtccttcaggatggcgacagctct
gtttcaaacatagagttgggcgggtccggaaacaatgcctcctcgaccaaaatcgtaaac
aatcaggccccgatcgcaggaaacgggcaggaaattatcgaaaccaacagcccgcctctg
caaccggttacccagcctgacaccggcgacacctttggcaacggctttggcggcgggggt
ggcgctggtggcacatcgggttctggcggctcatctgcggctgcccgctcggtgggcggc
ggcgggggtggtggcggcaccacaaccattgctggtgccagtgctgatgatgcggcggcg
ggggcttcgggctccgatgttctttcggtaaatgatgtcgaaggtgcgggtggtgaaaac
ctgacactgaacatcaatgttttcgaagataactccacctcgatctatttcatcctgatc
cagggcatgcctgatggtgcgaccctttctgccggtgacaatctcggcaacgggatctgg
caggtcagcgttgatgaacttgatgggctgagcgttgcaattaccgaagaaaccatcggc
aattacaatgttactgtcactgtcatcaacaccgaaaccggtgaagtcgtcgatagcgag
tcttttgaacttgctgcaaatgacggtgcagacgccccgacgctcagcgttgaccctgct
tcgggcaacgaagacagcgcaattgcacttgatatcaccgccggtctgaccgatgcggat
gagaccctgtcggtgaccatcagcgacatcccggctggttccaccctctcggctggtacc
gtcaatccggatggcaccgtcaccctaactgccggtgagctggcaggtttgaccatcacc
ccgccggaagatttcagcgggtcgtttgatctgaccgtgacggcgacttcgaccgaagga
tcggatacggcatctgttagtgaaacactggccgtcaccgtcgatgcccaggcagacgcc
ccgacgctcagcgttgacccggcatcgggcaacgaagacagtgccattgcgctcgatatc
accgctggtctgactgatgcggatgaaactctgtcggtcaccatcagtgacatcccggcg
ggatccactctgtcggctggtaccgttaatccggatgggactgtgaccctgactgccggt
gagctggctggtctgaccatcacaccaccggaagacttcaacgggtcgtttgatctgact
gtcactgccacctcctcggatggcgcagatacttcgtcgattgctgataccctgtcggtc
aacgttgacccggttgccgatgcaccggctgtcacgatcgatattgatccggtcatcgaa
gaaaatgttccgtctgatctgaccatcaccctcgatccgcttgaggccgatgttaccgca
gaaatcaccgtcaccggtctgcccgctgatgcaacgctcagtgccggcacccagaacccg
gatggcagctggaccctttccgaaggcgaccttgcgggcttgaccctcacggtttcgaca
accgtcaatatctccttcacggtggatgtcaccgtgacacacaccatcaatggcacaacc
gacagcacgacccaaagtgcgactgtcgatgtggtcgatgctggcgcactgccaagtgtt
actgtcagcttcgatggtgccgtgctggaagatgctgcaacacctctcgatatcagtgtc
gccgttgaaagcggtgaaagtgttgtcgaagtcactgttgacggcctgcctgccggtacc
actctttctgccggaaccgtcaatcccgacggctccgttaccctgaccccgggcgaactg
gccggtctgaccctgaccccgcctgacgattacaatggcagccttgatttcacggtaacc
gctgaaaccacgtccggagccggcaccgaaaccgttaccgaaaacgtctcgacaacggtt
gaagccgttgccggcaccccgatcctgactgtcaatggcgccagcggtgctgaagatggc
ggtgccatcacgcttgatatcacggccggtgtaaccgatgccggtgaaggcctggaaatc
accatcagtgacattcctgctggttccaccttgtcggctggcaccgtcaatccggatggg
acggttaccctcaccgctggcgagttggcaggtctgaccatcaccccaccggaagacttt
agtgggtcgtttgatctgactgtcaccgccacctcctcggatggtgcagacaccgcatcc
atcgcagataccctctcggtcaccgttgatccggttgccgatgctccgacgctcagtgct
gatccggcttcgggtaacgaagacagtgcaattgcgctcgatatcaccgccggtctgacc
gatgcggacgaaaccctgtcggtgaccatcagcgacatcccggcgggttccaccctgtcg
gctggtaccgtaaacccggatgggactgtgaccctcactgccggagagctggcaggtttg
acgattaccccaccggaagacttcagcgggtcgtttgatctgactgtaaccgccacctcc
tcggatggtgcagacaccgcatccatcgccgataccctgtctgtcaccgttgatccggtt
gctgatgctccgacgctgagcgttgatccggcttcgggcaatgaagacagtgccattgcg
cttgatatcaccgcaggtctgactgatgcggatgagaccctgtcggtcaccatcagcgac
attccggctggttccactctgtcggctggtaccgttaatccggatggcacggttaccctt
accgctgcggaacttgccggtctgacaatcacgccgcctgctgattactatggctcgttc
gatctgacagttaccgcgacttcggttgatggctcagactctgcatctgtctctgaaacg
cttacggttcaggttgaaaacgttgcagacggtcctgagttgacccttggtctgccagcc
ctgtgcctcgaagacacggcttgtggtctgaccattgatgttggcgtactggcaccatca
gaagttcttgaagtcaccatcgaagggctgcccaatgatgggaccctgtcggcgggcatc
aaaaacccggatggcagttggaccctgacccaggcagaacttgtcggcctgactgtcacc
gtccttgagcccggtgattcgcttctgaccgtaaccgccaccgtcaatgatccgatcagt
ggcaccagcgacagcaccattgccaacatcaatcttgaggtcctcaatgtcgcagaaggc
ccgaccctgaatttggggctgccggcactgtgtctggaagacacagcctgtggtctgacc
atcgatgttggtgtgctggcaccatcagaagttcttgaagtcaccatcgaagggctgccc
aatgatgggaccttgtcggccggcatcaaaaacccggatggcagttggaccctgacccag
accgaactggtcggcctgactgtcaccgtgcttgagcccggggattcgcttctgaccgtg
accgccaccgtcaatgacccgatcagcggcaccagtgacagcaccattgccaacatcaat
cttgaggtcctcaatgtcgcagaaggcccgaccctgaatttgggtctgccggcgctgtgc
ctcgaagacacggcttgcggtctgaccatcgatgttggtgtgctggcaccgtcagaagtt
cttgaagtcaccattgaagggctacccaatgatgcgaccttgtcggccggcatcaagaac
ccggatggcagctggaccctgacccaagccgaactggtggggctgactgtcaccgtcctt
gagcccggtgattcgcttctgaccgtgaccgccaccgtcaatgacccgatcagtggcacc
agtgacagcaccattgccaatatcaatcttgaggtcctcaatgtcgcagaaggcccgacc
ctgaatttgggtctgccggcgctgtgcctcgaagacacggcttgcggtctgaccatcgat
gttggtgtgctatccccaaccgaggtacttgaagtcaccatcgaaggattgcctaacgat
gcgaccctgtcggccgggatcgaaaaccccgatggtagctggaccctgacacaggctgaa
ctcgtcggtttgaccgttaccgcgctggagccgggggattcgcttctgaccgtgaccgcc
actgtcagtgatccaatcagcggcaccagtgacagcacgattgccaacatcaatctggaa
gttctcaatatcgcagatgcaccgacacttgatctgtcgctttctgctgctgtgatcgag
gactcgcccacgccgcttttgattacggtaagtgatcttgcccttaccgaggatgtcacc
ctgacaattgacggggtggataacggtgcgacgcttaatgccggaacgcttaacccggat
ggcacctatacgcttgagcttctggatctggtgggtctggcgatcacgccggacaccgaa
gacgatctgcaattgtcgatcacggcgacggttgaagattcttcgagcaatactgtggcg
acaacgacggcaacgctggatatcgatgtgctgccaaatccgttggatccgttgatctga
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