Thermococcus sp. 5-4: CDI07_00245
Help
Entry
CDI07_00245 CDS
T05088
Name
(GenBank) 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thh03016
]
CDI07_00245
Enzymes [BR:
thh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
CDI07_00245
Transfer RNA biogenesis [BR:
thh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
CDI07_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Fer4_12
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
ASA76791
UniProt:
A0A1Z2TK25
LinkDB
All DBs
Position
complement(50986..51987)
Genome browser
AA seq
333 aa
AA seq
DB search
MALTFKSNPNMPEEIASLFRKQHYALVGRHSSVKLCHWLKESIKHDRFCYKQKFYNIHSH
RCLQMTPVTAWCTHNCIFCWRPMEGFLGTELPEPWDDPAFIVEESIKAQRKLLVGYKGMP
GINMKKFEEAWNPKHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTVPERLEEMI
KEDKLPSQLYVSLTAPDVETYNRVNVPMIPDGWDRIKTFLEMMNGLPTRTVVRLTLVKGE
NMHNPEGYAKLIKLANPMFVEAKAYMFVGYSRNRLTINNMPRHEEIKAFAEELVKNLPGY
HIEDEYEPSRVVLIMRDDVDPRGSGREGRFIKH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaacgttcaagtccaacccgaacatgccggaggagattgcaagtctcttcagg
aagcaacactacgcgctcgtgggcaggcacagctcggtcaagctctgccactggctaaag
gagagcataaagcacgaccgcttctgctacaagcagaagttctacaacatacactcccac
cgctgcctgcagatgacgccggttacagcgtggtgcacccacaactgcatattctgctgg
cgcccgatggagggcttcctcggcacggagctcccggagccgtgggacgacccggccttc
atcgtcgaggagagcataaaggcccagaggaaactcctcgtcggctacaaggggatgccc
ggcataaacatgaagaagttcgaagaggcgtggaatccaaagcacgcggcgataagccta
tccggcgagccgatgctctacccatacatgggcgacctggtggaggagttccacaagcgc
ggtttcacgaccttcatcgtcaccaacgggaccgttccggagaggctcgaggagatgata
aaggaggacaagctgccaagccagctctacgtctcactgacggctcccgacgtcgagaca
tacaacagggtcaacgtcccgatgattcccgacggatgggacaggataaagaccttcctt
gaaatgatgaacggtctccccaccagaaccgtcgtgaggctgaccctcgtcaagggcgag
aacatgcacaaccccgagggctacgcgaaactgataaagctcgccaacccaatgttcgtc
gaggcgaaagcgtacatgttcgtcggctattcgcgcaacaggctcaccatcaacaacatg
ccgcgccacgaggagataaaggccttcgcggaggagctcgtcaagaatctgcccggatat
cacatcgaggacgagtacgagccgagcagggtcgttctcataatgcgcgacgacgttgat
ccccggggcagcggaagggaagggcgctttataaaacattga
DBGET
integrated database retrieval system
