Thermococcus sp. 5-4: CDI07_00790
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Entry
CDI07_00790 CDS
T05088
Name
(GenBank) ribosome assembly factor SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
thh
Thermococcus sp. 5-4
Pathway
thh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CDI07_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thh03009
]
CDI07_00790
Ribosome biogenesis [BR:
thh03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CDI07_00790
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
HpaB
Motif
Other DBs
NCBI-ProteinID:
ASA76891
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All DBs
Position
136324..137034
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AA seq
236 aa
AA seq
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MPISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPVEEILATPYVFKDAHKGDKAS
EHEMEKIFGTSDPYEVAKIILRKGEVQLTAEQRRQMLEDKRRYIATVIHRHAVDPRTGYP
HPVDRILRAMEEAGVHIDLFKDAEAQVPGVIKAIRPLLPIKMELKVIAVKIPGDYVGKAY
GEVRKFGTIKREEWASDGSWLFLIEIPGGIEDEFYEKLNALTKGNAVTKLIERKGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcccataagtgttgataaagccgtcatcgcccgtctgaagacgcacggcgagaccttc
gagatactcgttgacccctacctggcgagggacttcaaggagggcaaggacgtccccgtt
gaggagatcctcgccactccctacgttttcaaggacgcccacaagggcgacaaggccagc
gagcacgagatggagaagatattcggcaccagtgacccctacgaggtggcgaagataatc
ctccgcaagggggaggttcagctgacggcggagcagaggaggcagatgctcgaggacaag
aggcgctacatagcgaccgtgatccacaggcacgccgtcgacccgaggaccggctacccg
cacccagttgatagaatcctcagggcgatggaagaagctggagtccacattgacctcttc
aaggacgccgaggcacaggttcccggagtcatcaaggcgataaggccgcttctcccgata
aagatggagctgaaggtcatagccgtcaagatacccggtgactacgtcggcaaggcctac
ggggaggtaaggaagttcggaacgataaagcgcgaggagtgggccagcgacggttcgtgg
ctgttcctcatcgagattcctgggggaattgaggacgagttttatgagaagcttaacgcc
ctcacgaagggcaatgcggtaactaaacttatagagaggaagggactatga
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