Thermococcus sp. 5-4: CDI07_01925
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Entry
CDI07_01925 CDS
T05088
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
thh
Thermococcus sp. 5-4
Pathway
thh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDI07_01925 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thh03021
]
CDI07_01925 (rpoA2)
Enzymes [BR:
thh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDI07_01925 (rpoA2)
Transcription machinery [BR:
thh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CDI07_01925 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
Motif
Other DBs
NCBI-ProteinID:
ASA77105
UniProt:
A0A1Z2TKX0
LinkDB
All DBs
Position
complement(331361..332536)
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AA seq
391 aa
AA seq
DB search
MVAAKTIKSMVDKAELPDNIKEELYNKLIEYNKKYKLKKAEVQAIIDEAVKEYQRALIEP
GEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEKHRYDREKALEVARRIEGTSLENLAREMSIDILNFEFIVDIDPERLEKAGLDMERIQR
KLESSFKSAEFEVDGYTVIMRPKKVGKLSDLRRLSEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVIKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIEEIVNTMREQGLEV
DVRHIMLVADMMTLDGVILPIGRHGIVGEKASVLARAAFEITTQHLFEAAERGETDPLNG
VVENVLIGQPVPVGTGIVKLAMNLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgcaaaaaccatcaagagcatggttgacaaggccgagcttcccgacaacatc
aaggaagagctctacaacaagctcattgagtacaacaagaagtacaagctcaagaaggcc
gaggttcaggccatcatagacgaggccgtcaaggagtaccagagggccctcatcgagccg
ggcgaggcgataggaacagtcgccgcgcagtccatcggtgagccgtcaacgcagatgacc
ctcaacaccttccactacgcgggtgtcgcggaaatcaacgtcaccctcggtctgccgaga
attatcgagatcgttgatgccagaaagaacccatcaacgccaatcatgaccgtctacctc
gacgagaagcaccgttatgaccgcgagaaggccctggaggttgcgaggcgcattgaggga
acgagccttgagaacctcgcaagggagatgagcatagacatcctcaacttcgagttcata
gttgacatagacccggagaggcttgagaaggccggtctcgacatggagaggattcagagg
aagctagagagctccttcaagagcgctgaatttgaagttgacggctacaccgtcataatg
cgccccaagaaggtcggcaagctctccgacctgagaaggctctccgaaaaggttaaaaag
caccgccttaagggtctctcgggcgtcggaaagaccatcataaggaaggaaggcgacgag
tacgtcatctataccgagggctcgaacttcaagcaggtcatcaaggttccgggcgttgat
ccgacgaggaccagaaccaacaacatccacgagatcgccgaggtgctcggcatcgaggcg
gcaagaaacgccatcatcgaggaaatcgtcaacacgatgcgcgagcagggtcttgaggtc
gacgtcaggcacatcatgctcgtcgccgatatgatgacgctcgacggcgtgatactgccc
ataggcaggcacggtatagttggggagaaggccagcgtgcttgccagggctgctttcgag
atcaccacccagcacctcttcgaggcggctgagaggggtgaaaccgacccgctcaacggt
gtcgtcgagaacgtcctcatcggacagcccgtgcccgtcggtacgggaatcgtcaaactg
gcaatgaatctccccctgagaccgaaaagggagtag
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