Thermococcus sp. 5-4: CDI07_02375
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Entry
CDI07_02375 CDS
T05088
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thh03016
]
CDI07_02375
Enzymes [BR:
thh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CDI07_02375
Transfer RNA biogenesis [BR:
thh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDI07_02375
Prokaryotic type
CDI07_02375
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
YfjL_C
Motif
Other DBs
NCBI-ProteinID:
ASA77185
UniProt:
A0A1Z2TL50
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Position
420215..421465
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AA seq
416 aa
AA seq
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MDYREFFSQFMYLSEGPGIGGRIKVHPEDFVVIEDPLPSIFEGRKHAIFLLKKRNWDTMS
AVKEIAKRAGINYRDIGFAGTKDRHAVTYQYISVPQDAKEKVENVRIRDVELRFVSYGRF
IKLGHLLGNRFRIIVRDVDERAFERSKEIMRELRDKGGFPNYFGYQRFGERRVTNHLIGK
LLLQGDFEAAARLFLGAHEGGMEGDEARRRFWETGDVERALEEFPNFLRYERTLLYRYKE
TGSWRRAFLSLPLPIMRIFIHAYQSYLFNIYISRRIERGIPLNEALVGDIVVQVKGGIPY
RDRTYRVTETNIDFVNEKIRRGEAALSGPLFGFAMRKALGLPGNLEEEILAEEGITLETF
RKLPKPMAEPGGRRELLIKPLGMTYGYIPGTGMCFRFFLPKGTYATSVLREIMKDH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggactaccgcgagttcttctcccagttcatgtatctgagcgaggggccaggtatcggc
gggaggataaaggttcatcccgaggatttcgtggtcattgaagacccccttccctcgatt
ttcgagggcaggaagcatgccatctttcttctcaaaaagaggaactgggacacgatgagc
gcggtgaaggagatagcgaagcgcgccgggattaactacagggacatcggctttgccggg
acgaaggacaggcacgcggtgacgtatcaatacataagtgtgcctcaagacgcgaaggag
aaggttgaaaacgttcggatcagagacgttgagctccgcttcgtttcctacggtcggttt
ataaaactcggtcacctcctcggaaaccgcttcaggataatcgtgagagacgttgatgaa
agggccttcgagcggagtaaggaaataatgagagaactccgcgacaaaggcggctttccg
aactacttcggctaccagcgctttggagagcggcgcgtcacgaaccacctcataggaaag
ctcctcctccagggagattttgaggctgcggcgaggctgttcctcggagcacacgagggt
ggcatggagggtgacgaagccaggaggcgcttctgggagacgggcgacgttgagagggcc
ttagaggaatttccgaacttcctgcgctatgagagaacgctcctctaccgctacaaggag
acggggagctggagaagggccttcctctcgctgcccctcccgataatgcgcatcttcatc
cacgcttaccagagctacctcttcaacatctacatttccaggaggattgagaggggcatt
cctctgaacgaggccctcgtcggcgatatcgtcgttcaggtcaaagggggaattccctac
cgcgacagaacgtaccgtgtcactgagacgaacatcgacttcgtgaatgaaaagatacgg
cgcggcgaggccgcccttagcggcccgctcttcggctttgcgatgagaaaagccctgggg
cttccggggaatcttgaagaggagattcttgcggaggagggcataacgctcgagaccttt
agaaagcttcccaagccgatggccgagcccggcggcaggagggagcttctgattaagccc
ctaggaatgacctacggctacatccccggaacgggcatgtgcttccgcttcttccttccg
aaaggaacctacgcaaccagcgtgctcagggagataatgaaggaccactga
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