Thermococcus sp. 5-4: CDI07_02620
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Entry
CDI07_02620 CDS
T05088
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thh03016
]
CDI07_02620
Enzymes [BR:
thh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CDI07_02620
Transfer RNA biogenesis [BR:
thh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDI07_02620
Prokaryotic type
CDI07_02620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASA77228
UniProt:
A0A1Z2TLA0
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All DBs
Position
complement(463936..464739)
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AA seq
267 aa
AA seq
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MRIALRIAYDGTAFYGFQRQPDVRTVEGELIRVLSKLGVIGDAESSNFKGASRTDRGVSA
FFNVVAFDVENRPDLVRGEVLNHHLRDAWVLGVAEVPDGFHPRFWAKSKTYRYYLVDEGF
DEEAMRNCASLFIGTHDFSAFARLEPGKDPVRELTRLEVSRRHGYYVIEIEGKSFLWEMA
RRIVNAIRLCGLGLMEPEEVERMLAGDYEKKVPPARPEGLILWHISYEGIEFEGDERGLN
KAKRDLFERYSRALTRAALLGDVLIEL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgccctcaggatagcgtacgacggcacggcattctacggatttcagagacag
ccggacgttagaaccgtcgagggtgagctaatcagggttctctcaaagctcggagtaata
ggggacgccgagagctcgaacttcaaaggggcctccagaaccgacaggggcgtctccgcg
ttcttcaacgtcgtggcctttgacgttgagaacagacccgacctggttaggggggaggtt
ctcaaccaccacctccgcgatgcctgggttctcggcgttgctgaggtgccggacggcttc
cacccgcgtttctgggcaaagtcaaagacctacaggtactacctggttgatgaggggttc
gacgaggaagccatgagaaactgcgcctccctcttcatcggaacgcacgatttctccgcc
ttcgctagactggagccgggaaaagaccctgtgagagagctgacgcgccttgaggtgagc
cggcgccacggctactacgtcatagagattgagggcaagagcttcctctgggagatggcg
aggagaatagtcaacgccattcgcctctgcgggctgggcctgatggagcccgaggaagtt
gagaggatgctcgcgggggactacgagaaaaaggtaccccccgcgagaccggagggcctg
atactgtggcacatatcctacgagggaatagagttcgagggggatgaacggggcctcaac
aaggcgaagagagacctgttcgagcgctactcacgagcgcttacgagagcggcccttctt
ggggacgttctcatcgagctttga
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