Thermococcus sp. 5-4: CDI07_03200
Help
Entry
CDI07_03200 CDS
T05088
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
thh
Thermococcus sp. 5-4
Pathway
thh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CDI07_03200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thh03019
]
CDI07_03200
03012 Translation factors [BR:
thh03012
]
CDI07_03200
Messenger RNA biogenesis [BR:
thh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CDI07_03200
Translation factors [BR:
thh03012
]
Eukaryotic type
Release factors
CDI07_03200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
zf-RRPl_C4
Zn_ribbon_8
TssR_VWA
zinc_ribbon_6
Wtap
Motif
Other DBs
NCBI-ProteinID:
ASA77337
UniProt:
A0A1Z2TLL8
LinkDB
All DBs
Position
complement(565544..566791)
Genome browser
AA seq
415 aa
AA seq
DB search
MSHKSAEMYELKKKVDELKSYRGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKS
TRKNVLGALERAMQHLKLYRKTPETGLALFVGNVSEQEGVSDIKLWAIVPPEPLKVRLYR
CDQTFITEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIDVIDELTSNVPGKTRAGGQS
ARRYERIREQETHEFMKRIGEHANKAFLPLLEKGELRGIIIGGPGPTKEEFVDGDYLHHE
LRKKVIGVVDISYHGEYGLRELVEKASDILKDHEAVKERHLIQDFFRHLVKDTGMITYGE
KEVRKALELGAVDTLLLSEGYDKVRVRAKCNNCGWQEEKTMSEQEFHVYKKKLTHCPKCG
SQNISFEKWDVAEEFIKMAEESGSEVEIISLDTDEGQQFYKAFGGLGAFLRYKIQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaagtcagctgaaatgtacgaactcaagaagaaggtcgatgagctgaagagc
tatcgaggccgggcaaccgagctggtcagtctatatattcccgctggatacgacataaac
aaggtcatgcagcagttgcgagaggagtacggaacggcgcagaacatcaagtccaaatca
actcgaaagaacgttctcggcgcccttgagagggccatgcaacacctcaagctctaccgc
aagacgcccgagacgggtttggccctcttcgttggcaacgtcagcgagcaggagggcgtc
agcgacataaagctctgggcgatagtcccgcccgagccgctgaaggtcaggctctatcga
tgtgaccagacctttataaccgaaccccttgaggagatgctccgcgtaaaggacgcctac
ggcctcatcaccgttgaaaagaacgaagcgacgataggcctcctcaggggaaagcgcatt
gacgtcatcgacgagctgacttcaaacgttcccggaaagacccgcgccggtggtcagtcg
gcgaggcgttacgagaggattcgcgagcaagagacccacgagttcatgaagcgcattggt
gagcacgccaacaaggcctttctcccgctccttgagaagggcgagctcaggggaataatc
atcggcggccccgggccgaccaaggaggagttcgttgatggggactacctccaccacgag
cttcgaaagaaggtcatcggtgttgtggacatcagctaccacggcgagtacggtctgagg
gagctcgtcgagaaggccagcgacatactcaaggaccacgaggcggtcaaggagaggcac
ctcatacaggacttcttcaggcacctcgtcaaggacaccgggatgataacatacggtgag
aaggaggtaaggaaggcccttgagctcggtgccgttgacacgctcctgctcagcgagggc
tacgacaaggttcgcgttagggcaaagtgcaacaactgcggctggcaggaagagaagacc
atgagcgagcaggagttccacgtctacaagaagaagctcactcactgccccaagtgtggc
agtcagaacataagctttgagaagtgggacgtcgccgaggagttcataaaaatggcggag
gagagcggctccgaagtcgagataatctcccttgacacggacgagggccagcagttctac
aaggccttcgggggcctcggagccttcctcaggtacaagattcagtga
DBGET
integrated database retrieval system
