Thermococcus sp. 5-4: CDI07_03870
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Entry
CDI07_03870 CDS
T05088
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
thh
Thermococcus sp. 5-4
Pathway
thh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDI07_03870 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thh01007
]
CDI07_03870 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thh03016
]
CDI07_03870 (glyS)
03029 Mitochondrial biogenesis [BR:
thh03029
]
CDI07_03870 (glyS)
Enzymes [BR:
thh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
CDI07_03870 (glyS)
Amino acid related enzymes [BR:
thh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CDI07_03870 (glyS)
Transfer RNA biogenesis [BR:
thh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CDI07_03870 (glyS)
Mitochondrial biogenesis [BR:
thh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CDI07_03870 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
DUF5830
DUF5795
tRNA-synt_2d
DUF5915
Motif
Other DBs
NCBI-ProteinID:
ASA77466
UniProt:
A0A1Z2TM07
LinkDB
All DBs
Position
complement(692338..694050)
Genome browser
AA seq
570 aa
AA seq
DB search
MGERPDKYEVLQDLMRRRGFAWGSFEIYGGARGFYDYGPLGATIKRKIEQKIREAFQREG
FFELETPDITPEKVFIASGHVDKFVDPLVECKKCGARFRADHLVEEALGIDTEGMSAEHL
TQLIREHDIRCPECGGELSEVWYFNLMFETKIGPYGDQKGYLRPETAQGIFVNFRRLNAF
ARNKLPFGVFQIGKAYRNEISPRQGMLRLREFTQAEAEIFFNPKETEHPHFDEVKDEVLR
LYPIENQLKNLGIIEMTAEEAVKNGYVLNTFFAYYMVMVKRTLLDIGIPEKAIRFRQQLP
EERAHYSSDTWDVEIHSERFGWVECVGIAYRGDYDLSKHMKMSGADLTVLIHYDEPKIVK
RLKVSLNMKRVGPKLKKDAKRINDLIQGWDEEKLRNLVEVLEKDGKITIEGYELEKDDFI
IKEVEEKITGEKIVPHVLEPSFGIDRPFYLLLENSLVIEEDRTYLKLKKDMAPIEVAVLP
LVAKEPLKSIAYDVFRTLQKAGFIAVYDEKDTVGRRYMRYDEIGTPYCVTIDNQTPEDNT
VTIRDRDTREQVRVKIEELPEKLRELIFGE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaggcccgataagtacgaggttcttcaggacttgatgaggagaagaggcttt
gcctggggcagctttgaaatctacggtggtgcgaggggtttttacgattacggtcctctt
ggagcgacgataaagagaaaaatcgaacagaagatacgcgaggccttccagagggagggc
ttctttgagcttgaaacgccagacatcacgccggagaaggtcttcatagcgagcggtcac
gttgacaagttcgttgacccgctggtcgagtgtaagaagtgcggggcaaggtttagggcc
gaccacctcgtcgaggaggccctcggcatcgacacggagggcatgagcgccgagcacctc
acccagctcatccgcgagcacgatatccgctgcccggagtgcggaggcgagctttccgag
gtctggtacttcaacctcatgttcgagactaaaatcggcccctacggcgaccagaagggc
tacctgaggcctgaaacggcccagggcattttcgtgaacttcagacgcctcaacgctttc
gcgaggaacaagcttcccttcggtgtcttccagattggaaaagcataccgcaacgagatt
tcacctagacagggaatgctccgcctgagggagttcacacaggcagaggcggagatattc
ttcaaccctaaggagaccgaacatccccacttcgacgaggtcaaggacgaggttctgcgc
ctctacccaatagagaaccagctcaagaacctcggaataatcgaaatgactgcggaggag
gccgttaagaacggctacgttctgaacaccttcttcgcctactacatggtcatggtcaag
agaactctcctcgacatcggcattcccgagaaggccatacgcttccgccagcagctgccc
gaggaaagggcacactactcaagcgacacctgggacgtcgagatacacagcgagcgcttc
ggatgggtggagtgcgtcggcatagcctaccgcggcgactacgacctcagcaagcacatg
aagatgagcggggcagatttaaccgttctcatccactacgacgagcccaagatagtcaaa
cgcctcaaagtgagcctcaacatgaagcgcgtcgggcctaagctgaagaaggacgccaag
aggataaacgacctcattcagggctgggacgaagagaagctgaggaacctggttgaagtc
cttgagaaggacggcaaaatcaccatcgagggctacgagctggagaaggatgactttatc
atcaaggaagtggaggagaagataactggcgagaagatagtgccccacgtccttgagccg
agctttggaatagacaggccgttctacctgctccttgagaacagccttgtcatcgaggag
gacagaacctacctcaaactgaagaaggacatggcaccgattgaggtcgcggttcttccg
ctcgtcgccaaggagcctctgaagagcatagcctacgatgtattcaggacccttcagaag
gcaggcttcatagcggtctacgacgagaaggacaccgtcggcaggcgctacatgcgctac
gacgagataggcaccccctactgcgtcaccatagacaaccagacacccgaagacaacacc
gttacgatccgcgaccgcgacacgagggagcaggtgagggtgaagatcgaagagctgccc
gagaagctcagggagcttatttttggggagtag
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