Thermococcus sp. 5-4: CDI07_04070
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Entry
CDI07_04070 CDS
T05088
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thh
Thermococcus sp. 5-4
Pathway
thh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDI07_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thh03400
]
CDI07_04070
Enzymes [BR:
thh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CDI07_04070
DNA repair and recombination proteins [BR:
thh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDI07_04070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Prolactin_RP
Motif
Other DBs
NCBI-ProteinID:
ASA77504
UniProt:
A0A1Z2TM62
LinkDB
All DBs
Position
complement(730892..731638)
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AA seq
248 aa
AA seq
DB search
MLLRFENLKKVGEVYINPGNLRTIPLALRDWRDFLSLDETTYGVYARTIYNPSERFLVVN
ERDEKTVRDLEGLYRELLKDSLRFCREEYHHYQLQVGEFEGLPFANGWAGSGIVLVGEAP
GRKGCGKTGICFYRDASGMLLRKTLFSLGINPDFVYMTNVVKCNPPGNRLRGFGEGELEL
LERELEVVKPRAIFAIGRTAEKALKRLGFEFTYLRHPAWYVRRGIREPNGDILEEYSAIK
EAFGEWTF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgcgcttcgagaacctcaaaaaggtcggcgaggtctacataaatccgggcaac
ctgaggacaatcccgttagccctccgcgactggagggactttctaagcctggatgagacg
acctacggagtctatgcaagaacgatatacaaccccagcgagcgcttcctcgttgtgaac
gagagggacgaaaaaaccgtccgagatctcgaaggtctctaccgcgagcttctcaaagac
tccctgaggttctgccgcgaggagtaccaccactatcagctccaggtgggtgagtttgag
ggattgcccttcgccaacggctgggctggctcagggattgttctcgtcggggaggcgccg
ggaagaaagggctgcggaaagacggggatatgcttctaccgcgacgcctcgggtatgctc
cttcggaagaccctatttagcctgggcatcaatccggactttgtctacatgaccaacgtc
gtgaagtgcaacccgcctggaaacaggctgaggggcttcggtgagggcgagcttgagcta
ctcgagagggagcttgaggtggtgaagccgagggccatcttcgccatcggcaggacggcc
gagaaggccctgaaacggctcggctttgagtttacctacctgagacacccggcctggtac
gtgcgcagaggcataagggaaccaaacggggatatactggaagagtactcggccataaag
gaggccttcggggaatggacgttctga
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integrated database retrieval system
