Thermococcus sp. 5-4: CDI07_05870 Help Entry CDI07_05870       CDS       T05088                                  Name (GenBank) DNA repair helicase   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism thh  Thermococcus sp. 5-4 Pathway thh03022   Basal transcription factors thh03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:thh00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     CDI07_05870   09124 Replication and repair    03420 Nucleotide excision repair     CDI07_05870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:thh03021]     CDI07_05870    03036 Chromosome and associated proteins [BR:thh03036]     CDI07_05870    03400 DNA repair and recombination proteins [BR:thh03400]     CDI07_05870 Enzymes [BR:thh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CDI07_05870 Transcription machinery [BR:thh03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      CDI07_05870 Chromosome and associated proteins [BR:thh03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     CDI07_05870 DNA repair and recombination proteins [BR:thh03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      CDI07_05870 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HBB Helicase_C_2 DEAD_2 ResIII DEAD SNF2-rel_dom AAA_30 AAA_19 AAA_11 HerA_C Motif Other DBs NCBI-ProteinID:  ASA77841 UniProt:  A0A1Z2TN18 LinkDB All DBs Position 1063893..1065821 Genome browser AA seq 642 aa AA seqDB search MSETGEGFEYFPYEELRPHQREFIDLVAEAVKNGENAIIEAPTGFGKTVSVLAGILPYAK EMGYKVLYLARTHRQMDRVIEELKAINRRNPVSGVELRSRKDLCLHTYLTQFTSDAYTAM VVCKNLKKLKKCEFYENEKKKKTEFDELVKFFLSEPSHPAEILSYAETLELCPYDLTKRI AEKADVIVASYLYLLSPTIRENFISSLDVDYSDLIVVFDEAHNLPDQAISALSDRISIHT VNRAIKEADEYNEHEIANFLSIFARGLEILYDEKLKDRDVHETPIQPELVFAHVIDILSL DTRRLVRILNDMVAVGDAIREDRIEKGKPPRSYIGRVGEFLLFWLSLIGREDYLFLMSRD RGLSLELVALDPSKALGFIRNVQSAVFMSGTLTPMEAFRDVMGIENVRMKKFPRMVKREN AQVLVAKDVSTRGDERSLQVYRRMVEYIVEAAKLIPKNVGVFTASYEVLQGLLSANLQVR LEETGKAIFIEKQGVSSAENDAMVASFKAHAKGRGAVLLGVMGGRNSEGQDYSGDEMNGV VLVGIPYARPTPRVQAQIRYFERKFPGKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSII VLDYRLLWSSIKKDLPDWMRESMRPVDRARMRLYLRRFWGTR NT seq 1929 nt NT seq  +upstreamnt  +downstreamnt atgagcgaaacgggcgaagggttcgagtactttccctacgaggaactcagaccacatcag cgggaattcatagacctcgttgcggaggcagttaaaaacggcgagaacgccataatagag gctcctaccggttttggaaagaccgtgagcgttctggcggggatcctgccttacgccaag gagatgggctacaaggttctctatctagccagaacccacagacagatggacagggtcata gaggagctgaaggcgataaacaggagaaacccggtttccggcgttgaactgagaagcagg aaggacctctgcctgcacacgtacctcacccagttcacgagcgatgcatacaccgccatg gtcgtctgcaagaacctcaagaagctcaagaagtgcgagttctacgagaacgagaagaag aaaaagacggaattcgacgagctggtgaagttctttctgagcgagccgagccatccggcc gagattctgagctacgccgaaaccctggagctgtgcccctacgatttaaccaagaggata gcggagaaggctgacgtcatagtggccagttacctctacctcctcagccccaccatccgg gagaacttcataagctccctcgacgttgactactccgacctgatagtcgtcttcgacgag gcccacaacctgccggaccaggcgatttcggctttaagcgaccggataagtatacacacg gtaaacagggcgataaaggaggccgacgagtacaacgaacatgagatagccaacttcctc agcatctttgccagggggctggagatactctacgacgagaagctcaaggacagggacgtg cacgaaacccccatccagccggagctcgtttttgcacacgtcattgatattctgagcctc gacaccaggaggctcgttagaatactcaacgacatggtggcggttggcgacgccataagg gaggacaggatagagaagggcaagccgccccgctcctacatcggccgcgtcggcgagttc ctcctcttctggctctcgctcattggacgggaggactacctcttcctcatgagcagggac agggggttgagccttgagctcgtggcgctggatccctcgaaagccctgggcttcatcaga aacgtccagagcgcggttttcatgtccgggaccctcaccccgatggaggccttccgcgac gttatgggcatcgaaaacgtccggatgaagaagttcccgaggatggtaaagcgggaaaac gcgcaggttttagttgccaaagacgtctcgacgagaggcgatgagcgttcgctccaggtt tacaggcgcatggtggagtacatcgtcgaggcggccaagctcataccgaagaacgtcggg gtcttcacggcttcctacgaggtccttcaggggcttctctcggcaaacctccaggttcgc cttgaggagaccggaaaggcgatattcattgagaagcagggcgtcagctcagccgagaac gatgcgatggtagcgagcttcaaggcccacgccaagggcaggggagcggtgctcctcggg gtcatggggggcaggaacagtgaggggcaggactacagcggcgacgagatgaacggtgtt gtgctcgttgggataccctacgcgaggccaactccgagggttcaggcccagataaggtac ttcgagcgcaagttccctgggaagggccgttactatggctattacctgccggcccacagg aagctcgtccaggcggctggaagagttcaccgctcggccgaggagaaagggtccataata gtcctagactaccgcctcctctggagctcgataaagaaggacctgccggactggatgcgc gagagcatgaggccagttgaccgagcgaggatgaggctgtacctgaggaggttctgggga acacgctga

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