Thermococcus sp. 5-4: CDI07_06040
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Entry
CDI07_06040 CDS
T05088
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thh03036
]
CDI07_06040 (smc)
Chromosome and associated proteins [BR:
thh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CDI07_06040 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
AAA_21
AAA_15
Rod_CreS
FKBP15
HH_AprE
APG6_N
CEP135_TSGA10_CC
MscS_porin
GAS
ATG16
CCDC122
SPC25_N
AAA_29
CALCOCO1
ACBP4_C
CENP-F_leu_zip
DUF3584
AKAP9_C
PspA_IM30
ABC_tran_CTD
CCDC192
Fez1
CCDC171
Laminin_I
PII1_coiled_coil
LEKR1
Filament
ZapB
EzrA
Tropomyosin
ODF2_C
CCDC89
LIP-1
CCDC113_CCDC96_CC
Plectin_PPL
Lectin_N
Sec2p
CLIP1
Flagellin_C
ATG17_like
CCDC18_2nd
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ASA77870
LinkDB
All DBs
Position
complement(1090995..1094561)
Genome browser
AA seq
1188 aa
AA seq
DB search
MPYIEKIEMKGFKSYGNRKVVVPLSKGFTAIVGANGSGKSNIGDAVLFVLGGLSAKAMRA
TRISDLIFAGTKTEAPAKYAEVVMYFNNEDRGFPIDEDEVVIKRRVYPDGRSTYWLNGKR
TSRSDILDVLSAAMISPEGYNLVLQGDITKFIKMSPTERRMLIDEISGIAEYDAKKEKAL
KELKQAEENLARVDLLIREVKTQLDKLEKERNDALRYLDLKERVERAKVTLLLGEIRKLK
SLIEENNLRDKEIEAEIAAIEERLKDIAKEIVAKEKELNAIEKELEEKSEDGILEVTRKI
SEVQSKIEMARKNIELAQKEIEDSQHRLAKTKEELKKVSEEIEKSRNAIQRWTKRREKLK
AEIKEKEVVKNELVIKLGEIDRDFAIAKQDFDKVVDELEEAKKELYMKESDIRKFEEEIE
RLKGKIAQEGAKRTALKSKIEEAKKSLEAKRSELGEIDGKMSRAEARLRKAEKELEEKTK
ALRKVEGELSKAREELIKAEAQREVRGNRAVEFLKNQNIPGLYGPLGELITVADRDYALA
VEVALGGNYDNVVVEDDRVAEKAIKLLKEKKLGRLTFLPLNKIKPRSMREKPSLGIPAMD
VVQYDPRFKNAVAYALGDTLIVNDMDEARTVGIGKVRMVTLGGELLERSGAITGGHYRPR
GKLGVNVDEIRKKVEKLEREKEAMESSINALKIEVKGLQNELFELRMRKSDLSKDLQVVQ
REMERLLAEDKALKESIEESEKLIEVLEKRIHGTKGDMAKLRGRIERLEKKKERLKKALE
NPEARELNQKIREVEHEISKLREELSKVESKLENLEIRINEELLPRKADLEEEIEGLVNR
INALKANITENEKAIKEFEKELEELRKAEESVKDELKELRERREKVKNEIIDLRSEKDEL
NSKLQELRIEANTLKIKLAQYEATLKEKQDELKHHDTKLIRSIKEVPLELEALREQIEKM
EEEIRSLEPVNMKAIEDFEVVERRYLELKSKREQVVAEKESIEEFIEEIEGQKRNVFMQT
LSEIAKNFSELFAKLSPGGSAKLILENPDDPFAGGLEIEAKPAGKDVKRIEAMSGGEKAL
TALAFVFAIQRYKPAPFYLFDEIDAHLDDANVKRVADLIKEASQNSQFIVITLRDVMMAN
ADKIIGVSMRAGVSRVVALSLEKAMKILEEARKRSEAEHAEMFGHLSG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacatcgagaagattgaaatgaaaggtttcaaatcctacggtaaccgaaaagta
gtcgttccgctttctaaggggtttacagcgatcgttggtgccaacggttctggaaagagc
aacattggtgacgccgttctcttcgttctcggtggactgtcggccaaagccatgcgcgca
accaggataagcgaccttatattcgcgggcacaaaaaccgaggcgccggcaaagtacgcc
gaggtagtgatgtacttcaacaacgaggacagaggctttcccatcgacgaagacgaggtt
gtgataaagcgccgcgtttatcccgatggcaggagcacctactggctcaacggcaagagg
accagcaggagcgacatcctcgacgttctcagcgcggcgatgatttcaccggagggctac
aacctggtcctccagggagacatcaccaagttcatcaagatgagccccactgagagaagg
atgctcatagacgaaatctctggaatagccgagtacgacgcgaagaaggagaaggccctg
aaggagctgaagcaggcggaggagaatctggcgcgtgttgacctgctcatccgcgaggtc
aagacccagctcgacaagctcgaaaaggagcgcaacgatgcccttcgctacctcgacctg
aaggagcgcgttgaaagggctaaagtaacgcttctcctgggcgagataaggaagctgaag
tccctgattgaggagaacaatctccgcgacaaggagatagaggccgagatagccgccata
gaggagcgcctcaaggacatagccaaggagatagtcgccaaggagaaggagctgaacgct
atcgagaaggagcttgaggagaagagcgaagacggcatccttgaggttacccggaagatc
agcgaggttcagtcgaagattgagatggcaaggaagaacatcgagctggctcagaaggag
atagaggacagtcagcacaggctcgccaagaccaaggaggagctgaagaaagtatccgag
gagatagagaagagcagaaacgccattcagcgctggacgaagaggcgcgagaagctcaag
gcggagataaaggagaaagaggtagtcaaaaacgaactggtcatcaagctcggcgagata
gacagggacttcgccatagccaagcaggactttgacaaggtcgttgacgaacttgaggag
gccaagaaggagctctatatgaaggagagcgatattagaaagttcgaggaagagatagag
cgccttaagggtaagattgcccaggagggtgccaagagaacggcactcaagtccaaaatc
gaggaggccaagaagtctcttgaggccaagcgctccgagctcggagagatagatggaaag
atgtccagggccgaggcgaggcttagaaaagctgaaaaggagcttgaggagaagaccaaa
gccctcagaaaggtcgaaggggagctttccaaggccagggaagagctcatcaaggccgag
gcccagagggaagttcgcggaaaccgcgcggtcgagttcctcaagaaccagaacattccc
ggcctctacgggcccctcggggaactgataaccgtcgcggacagggactacgctctagcc
gtggaggtcgccctcggcgggaactacgacaacgttgtggtcgaggacgatagggtcgcc
gagaaggccatcaagctcctcaaggagaaaaagctcggaaggctgaccttcctcccgctc
aacaagataaagccccgttcgatgcgcgagaagccctccctcggaatccccgcgatggac
gttgtccagtacgacccgcgctttaagaacgcggtagcatatgccctcggggatacgctc
attgtaaacgatatggacgaagccagaaccgtagggattggaaaggttcgcatggtgacc
ctgggcggtgagctccttgagaggagcggagcgataaccggcggtcactacaggccaagg
ggtaagctcggggtaaacgtcgacgagataaggaagaaggtcgagaagctcgaacgcgag
aaagaggccatggaatcctcaattaacgcgctcaagatcgaggttaagggtctccagaac
gagctctttgagctccgcatgaggaagagtgacctgagcaaggacctgcaggtcgtccag
agggagatggagcgtctcctcgccgaggacaaggccctaaaggagagcatcgaggagagc
gagaagctcatcgaggttctcgagaagaggattcacgggacaaagggcgacatggcgaag
ctccgcggaaggatagagaggcttgagaagaagaaggagaggctcaagaaggcccttgag
aaccccgaggctagggagctgaaccagaagatcagggaagtggagcacgagataagcaag
ctcagggaggagctcagcaaggtcgagagcaagctcgaaaaccttgagataaggataaac
gaagagctacttccgaggaaagcggacctcgaggaggagatagagggtctcgtgaacagg
ataaacgccctcaaggccaacatcaccgagaacgagaaggccatcaaggagttcgagaag
gaacttgaggagctcagaaaggctgaggagagcgtcaaggacgagctcaaggagctccgc
gagaggcgcgagaaggtcaagaacgagataatagacctccgctcggagaaggacgagctc
aactccaagctccaggagctgcgcatcgaggccaacaccctcaagataaagctcgcccag
tacgaggcaacgctgaaggagaagcaggacgagctgaagcaccacgataccaagctcata
aggagcatcaaggaagtcccactggagcttgaggctttgcgggagcagatagagaagatg
gaggaggagatacgctcccttgagcccgtcaacatgaaggccatagaggacttcgaggtc
gttgagcgtcgctaccttgagctgaagagcaagcgcgagcaggtcgttgccgagaaggag
agtatagaggagttcatcgaggagatagaggggcagaagaggaacgtcttcatgcagacc
ctcagcgagatagccaagaacttctcggagctcttcgcgaagctctctccgggaggaagc
gccaagctcatccttgagaatccggacgaccccttcgcaggaggcctcgagatagaggcc
aagcctgcaggaaaggacgtcaagaggatagaggccatgagcggcggtgagaaggcttta
actgccctcgccttcgtcttcgcgatacagcgctacaagcctgccccgttctacctcttc
gatgagatcgatgcacacctcgacgatgccaacgtcaagcgcgtcgctgacctcatcaag
gaggcctcccagaacagccagttcatcgtgataactctgagggacgtcatgatggccaac
gcggacaagataatcggcgtcagcatgagggccggtgtctcgcgtgtcgttgcactcagc
ctcgagaaggccatgaagatactcgaggaggcaaggaagaggagcgaggccgagcacgcg
gagatgttcggtcacctgagcgggtga
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