Thermococcus sp. 5-4: CDI07_06165
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Entry
CDI07_06165 CDS
T05088
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
thh
Thermococcus sp. 5-4
Pathway
thh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CDI07_06165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thh03019
]
CDI07_06165
03009 Ribosome biogenesis [BR:
thh03009
]
CDI07_06165
04131 Membrane trafficking [BR:
thh04131
]
CDI07_06165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thh04147
]
CDI07_06165
Messenger RNA biogenesis [BR:
thh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CDI07_06165
Ribosome biogenesis [BR:
thh03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CDI07_06165
Membrane trafficking [BR:
thh04131
]
SNARE
SNARE associated proteins
Others
CDI07_06165
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CDI07_06165
Exosome [BR:
thh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CDI07_06165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_2
AAA_5
TIP49
CDC48_2
AAA_14
AAA_33
nSTAND3
RNA_helicase
Sigma54_activat
AAA_28
IstB_IS21
AAA_24
NPHP3_N
Mg_chelatase
Vps4_C
DUF815
AAA_lid_PRS2_C
AAA_7
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
Bac_DnaA
DUF5906
ATPase
PhoH
TsaE
AAA_3
SLFN-g3_helicase
AAA_17
NB-ARC
Zot
Motif
Other DBs
NCBI-ProteinID:
ASA77895
UniProt:
A0A1Z2TN65
LinkDB
All DBs
Position
1121582..1124098
Genome browser
AA seq
838 aa
AA seq
DB search
MIFGKDEERYEKIKLRVAEALKRDVGRGIVRFDRKYQKQLGVEPGDIVELIGERTTAAIV
ANPHPDDRGLDIVRMDGYIRRNAGVSIGDYVTVAKAEVQEAKKVVLAPAQKGVFIQIPGD
MVKQNLLGRPVLKGDLIVASSRSEGGYYGGSPFDELLRGLFETMPIGFGELKFVVVNTVP
RGIVQITYNTEVEVLPQAVEIREEAIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFER
LGIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKD
AEENAPSIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKGRGKVIVIGATNRPDA
LDPALRRPGRFDREIEVGVPDKKGRKEILQIHTRGMPLEPDYDKATVLKVLKELLKRETF
ERAKLERLIERVEAAKSDEEVKEALKSESEVYPEVRSRLIDRMLEEIAEKTHGFVGADLA
ALAREAAMVVLRRLINEGKISPEQERIPPEVLQQLRVRKADFYEALKMVEPSALREVLIE
MPNVRWEDVGGLEEVKQELKEAVEWPLKYPKAFQRLGIEPPRGILLYGPPGTGKTLLAKA
VATESEANFIGIRGPEVLSKWVGESEKRVREIFRKARQAAPTVIFIDEIDAIAPARGSDM
SRVTDRLINQLLTEMDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLILVPAPDEKAR
LEILRVHTKRVPLASDVNLRELAKKTEGYSGADIEALVREAALLAMRRIMAELPAELVEE
ESEEFLEKLRVSRRDFEEALKKVKPSITPYMVEYYRNFEESRKSRVEKRAAGPDYYTF
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatttttggtaaggacgaggagaggtacgagaagataaagctccgcgttgccgaggct
ttgaagagagacgttggaagggggatagtccgcttcgaccggaagtatcagaagcagctc
ggcgtcgagcccggcgacatcgtcgagctgattggagagagaaccaccgccgcgatagtc
gcgaatccccatcccgacgaccgtggactggacatcgtcaggatggacggctacatcagg
aggaacgccggggtgagcatcggcgattacgtcaccgtcgccaaggccgaggtgcaggag
gcgaagaaggtcgtgctggcgccggcccagaagggagttttcatccagatacccggcgat
atggtcaagcagaacctcctgggcaggcccgttctgaagggggacctcatagtggcaagc
agcagaagcgagggcggctactacggcggctcacccttcgacgagctgctcaggggtctc
ttcgagaccatgcccatcggctttggggagctcaagttcgtcgtcgtgaacaccgtccct
aggggcatagttcagataacctacaacaccgaggtcgaggttcttccgcaggcggtggag
atacgcgaggaggccatcccggaggtcacctacgaggacataggcggtctgagcgatgcg
attcagaagatacgcgagatggtcgagctgccgctcaagcacccggagctcttcgagagg
ctcggcatcgagccgccgaagggagttctcctatacggcccgccgggaacaggtaagacc
ctccttgcaaaggccgttgcaaacgaggccaacgcgcacttcatagccatcaacgggccg
gagataatgagcaagttctacggtgagagcgaggagcgtttgagggagatattcaaggac
gccgaggagaacgcaccgagcatcatattcatagatgaaattgacgccatcgctccgaag
agggaggaggtcgtcggggaggttgagaagcgcgttgtcagccagctgctcacgctcatg
gacggcctgaagggcaggggcaaggtcatagtcataggtgcaaccaacaggcccgatgcc
ctcgacccggcattgagaagacctggcaggttcgacagggagatcgaggtcggcgttccc
gacaagaagggcaggaaggagatactccagatacacaccaggggaatgccccttgagccg
gactacgacaaggccaccgtcctcaaggttctcaaagagctcctgaagagggagaccttt
gagagggcgaaactggagaggctcatcgagagggtcgaggccgcaaagagtgacgaggag
gtcaaggaggccctcaagagcgagagcgaggtctatcctgaggtcaggagcaggctgata
gacagaatgctagaggagatagccgagaagacgcacggcttcgttggagccgacctggcc
gcactagccagggaggccgccatggtggtcctcaggaggctcatcaacgagggcaagata
agcccggagcaggagaggattcctccggaggttcttcagcagctgcgcgttagaaaggcg
gacttctacgaggccctcaagatggtcgagccttccgctttgagagaagtcctcatcgag
atgcccaacgtccgctgggaggacgtcggtgggctcgaggaggtgaagcaggaactcaag
gaagccgttgagtggcccctcaagtacccgaaggccttccaaaggctcggaatagagccg
ccgaggggaatactcctctacggtccgcccggaacgggtaagaccctcctcgctaaggcg
gtcgcaaccgagagcgaggcgaacttcatcggcatccgcgggccggaggtgctcagcaag
tgggtgggcgagagcgagaagcgcgtgagggagatattccgcaaggcccgccaggcggct
ccaactgtgatattcatcgacgagattgacgcgatagcccccgccaggggaagcgacatg
agcagggtcaccgacaggctcataaaccaactgttgactgagatggatggcatagagcgc
aacagcggtgtggtcgtcatagccgcaacaaacaggccggacatcctcgatccggctttg
ctgaggcccggacggtttgatagactcatactcgttccggcaccggacgagaaggccagg
ctggagatactcagggttcacacgaagcgcgtcccgctggcgagcgatgtgaacctccgc
gagctggcgaagaagacggaaggctactccggagctgacatagaggccctcgtgagggag
gcagcgctgctggcgatgcgcaggataatggccgaactcccggcggagctggtcgaggag
gagagcgaggagttccttgagaaactcagggtttcaaggagggacttcgaggaggccctc
aagaaagtcaagccgagcataacgccctacatggtcgagtactacaggaacttcgaggag
agcaggaagtcaagggtcgagaagagggcagccggtccagactactacaccttctga
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