KEGG   Thermococcus sp. 5-4: CDI07_06195
Entry
CDI07_06195       CDS       T05088                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
thh  Thermococcus sp. 5-4
Pathway
thh03030  DNA replication
thh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:thh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDI07_06195
   03410 Base excision repair
    CDI07_06195
   03450 Non-homologous end-joining
    CDI07_06195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thh03032]
    CDI07_06195
   03400 DNA repair and recombination proteins [BR:thh03400]
    CDI07_06195
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thh04147]
    CDI07_06195
DNA replication proteins [BR:thh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CDI07_06195
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CDI07_06195
DNA repair and recombination proteins [BR:thh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CDI07_06195
Exosome [BR:thh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CDI07_06195
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc_N DUF8272 5_3_exonuc
Other DBs
NCBI-ProteinID: ASA77901
LinkDB
Position
1128336..1129361
AA seq 341 aa
MGVQIGELVPRKEIELENLYGRKVAIDAFNAIYQFLSTIRQRDGTPLMDSRGRITSHLSG
LFYRNINLMEAGIKPAYVFDGKPPEFKKKEIEKRREAREEAEEKWYEALERGDLEEAKKY
AMRATKVNEQLINDAKRLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDYDSLLFG
APRLVRNVTITGRRKLPGKNVYVEVRPELIVLEEVLKELGIDREKLIEMAILVGTDYNPG
GIKGIGPKKALTIVKRTKDPLKKYNKDSEVDLYAIKEFFLNPPVTDEYELKWREPDEEGI
LKFLCDEHDFSEERVKNGLERLKKAVKAGKQATLESWFGKR
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggcgtacagataggcgagctcgttccgaggaaggagatagaactggagaacctctac
gggagaaaggtcgcaatcgacgcgttcaatgcgatataccagttcctctcgaccataagg
cagcgcgatgggacgccgctcatggactcccgcgggaggataacctcccacctcagcggc
ctcttctacaggaacatcaacctcatggaggccggaataaagccagcctacgtcttcgac
gggaagcccccggagttcaaaaagaaggagatagagaagcgccgcgaggcgagggaagag
gccgaggagaagtggtacgaggctttggagcgcggcgacctcgaggaggccaagaagtac
gcgatgcgtgcgaccaaggtaaatgagcagttgataaacgatgccaagaggctccttgag
ctgatgggaatccccgtgatccaggctccgagcgagggtgaggcccaggccgcttacatg
gccgctaaaaagaaggtctacgcttccgcgagtcaggactacgactcgctcctctttgga
gcccccagactggtgaggaacgtcacgataaccggcaggagaaagctcccgggaaaaaac
gtctacgttgaggtcaggccggagctgatagttctggaggaggttctcaaggaactcggc
atagacagggagaagctcatagagatggccatactggtcggcacggactacaaccccggc
ggaataaagggaatcggaccgaagaaggccctcaccatcgttaagcgcacaaaagacccg
ctgaagaagtacaacaaggacagcgaagtcgacctctacgcgataaaggagttcttcctg
aatcccccagtcaccgacgaatacgagctcaagtggcgcgagccggacgaggaaggaatt
ctaaagtttctctgcgacgagcacgacttcagcgaggagagggtaaagaacggacttgag
aggctgaaaaaagccgtgaaagcaggaaagcaggccacgctggaaagctggtttgggaag
cgctga

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