Thermococcus sp. 5-4: CDI07_06770
Help
Entry
CDI07_06770 CDS
T05088
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
thh
Thermococcus sp. 5-4
Pathway
thh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CDI07_06770 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thh03021
]
CDI07_06770 (tfb)
Transcription machinery [BR:
thh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CDI07_06770 (tfb)
Prokaryotic type
Archaeal type
TFB
CDI07_06770 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
A2L_zn_ribbon
RUBY_RBDX
FYDLN_acid
Cyclin_N
Trm112p
Zn_Ribbon_Prim
Zn_ribbon_tTFIIB
Zn_ribbon_IS1595
HTH_Tnp_ISL3
FtrD-like
Zn_ribbon_LysW
HTH_AsnC-type
Cyclin_C
DZR
Auto_anti-p27
YceG
Motif
Other DBs
NCBI-ProteinID:
ASA78011
UniProt:
A0A1Z2TNI6
LinkDB
All DBs
Position
complement(1222769..1223680)
Genome browser
AA seq
303 aa
AA seq
DB search
MADKNVCPVCGSDKLFYDPRRGEIVCSVCGYVVQQNVIDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDRDIHGNQITGMYRTKMRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMMLPRRVKEVAASLYRKAVMKKLIRGRSIEGMVSAALYAACRMESIPRTLDE
IAAVSKVTKKEIGRSYRFLARGLGLNLRPTSPIEYVDRFGDALGVSQRTKKRAKEILQEA
IRRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataagaatgtttgtccggtttgtggctccgataagttgttttacgacccgcgg
aggggcgaaattgtctgttctgtctgcggttacgtcgttcagcagaacgtcattgatgag
ggtcccgagtggcgtgccttcgatccggatcagagggcaaagcgcgccagaaccggtgcg
cccatgactttgatgatccacgataagggcctctccacagacatagactggcgcgatagg
gatatacacggcaaccagataaccggaatgtaccgtacgaagatgagaaggctcagaatg
tggcagcgcaggatgagaataaacgacgccgccgagagaaacctcgccttcgccctcagc
gagctggacaggatggcggcccagatgatgctgccgaggcgcgttaaggaagttgctgca
tcgctctaccgcaaggccgtcatgaagaagctcatcagggggaggtccatagagggaatg
gtttccgccgctctgtacgccgcctgcaggatggaaagcatcccaaggactctcgacgag
attgccgcggtttcgaaggtcacgaagaaggagatagggcggagctaccgcttccttgcc
aggggcctcggtcttaacctcaggccgaccagcccgatagagtacgtcgacaggtttggt
gatgcactcggcgtcagtcagcggacgaagaagcgtgccaaggagatactccaggaggcc
atcaggaggggcatcacgagcggaaagggtccgaccggattggcggccgctgcgctttac
gtcgcgtccctgcttgagggggagaagaagacccagcgcgaggtggccgaggtagcgcac
gtcaccgaggttaccgtgaggaacaggtataaggaactcgtcgagaagctcaacataaac
gtcccgatatga
DBGET
integrated database retrieval system
