KEGG   Thermococcus sp. 5-4: CDI07_07285
Entry
CDI07_07285       CDS       T05088                                 
Name
(GenBank) hypothetical protein
  KO
K09120  endonuclease dU
Organism
thh  Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:thh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thh03400]
    CDI07_07285
DNA repair and recombination proteins [BR:thh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CDI07_07285
SSDB
Motif
Pfam: Endo_dU
Other DBs
NCBI-ProteinID: ASA78111
LinkDB
Position
complement(1317189..1317776)
AA seq 195 aa
MIRKVKPQIRVVGFDDGTFSFSSKLEREKTILIGVVMKGSQEVVGVLSRWITVDGNDATD
AMIDAVNSSRFKDLRVIMLKGITYAGFNVVDLERLHSETGLPVVVVVRKRPDLAAMEGAL
RKHFTDAEGRIGLLRKAPSLVELVPERLYIQALGLEADTAAEIVRVTTKTGLIPEPLRLA
HMIASAVMRGESTRE
NT seq 588 nt   +upstreamnt  +downstreamnt
atgataaggaaggtcaagccgcagatccgcgtcgttggattcgacgacggaaccttctct
ttctcctccaaactcgaacgggagaagacgattctgataggcgtggtcatgaagggctcc
caggaggttgttggcgttctctcgcgctggataaccgtcgacggaaacgacgccaccgat
gcgatgatagacgccgtcaactcctccagattcaaagacctgcgcgtgataatgctgaag
ggaataacctacgccggcttcaacgtcgttgacctcgaaaggctccactccgagacgggc
ctgcccgtcgttgtcgtggtgaggaagaggccagacctagcggccatggagggggcgctg
agaaagcacttcaccgatgccgaggggaggataggccttctgaggaaagccccatctctg
gtggagctcgtcccggagaggctctacatccaagccctgggcctcgaagccgataccgcc
gcggagatagtccgggtgacgaccaaaacgggcctgattccggaacccctgaggctggca
cacatgatagccagcgccgtgatgaggggagagagcacgcgggagtag

DBGET integrated database retrieval system