Thermococcus sp. 5-4: CDI07_07730
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Entry
CDI07_07730 CDS
T05088
Name
(GenBank) ATP-binding protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thh03400
]
CDI07_07730
DNA repair and recombination proteins [BR:
thh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CDI07_07730
Archaeal homologous recombinant proteins
CDI07_07730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_13
AAA_29
AAA_21
ABC_tran
SbcC_Walker_B
Baculo_PEP_C
HMBD
FtsK_SpoIIIE
ABC_ATPase
Crescentin
RsgA_GTPase
ApbE
ORF11CD3
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ASA78190
UniProt:
A0A1Z2TP26
LinkDB
All DBs
Position
complement(1396059..1398716)
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AA seq
885 aa
AA seq
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MKIEKLIIKDFRSHGLTKVNFTSGINLIIGQNGSGKSSLLDALLVGLYWPSKPKDLRKED
ILRVDGKSTEITVFFEKDGVKYQLHRNITRGMAFAKYHDGSSWKHATETSQKAVRDWMEK
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYKNLLEVRKEIERRIK
STEDYLKSTENLDELIGEMERELSNALKEINKLSPQIPKLEKELERVEKKLGELDALEKE
INSLRLEAKEREGNRKRLETKLEGLEKRIAESKQRLSELEERVKEFRKLKEKAELYLKLS
NFRKRYVDEKARNEKLAENYRAQISAIEERLAELSELEKRLKELEKERGKLERKLKRLEK
DARAYEDAKSLSSQLEGLRKRLKLSREEIEKLSAEVEGAKRRKEEIQVELNEINEERGGL
KNLVKERNKAIMELKKAKGNCPVCGRKLTEKHRKEIIEKYQAELKEVSQSLKELDERERK
LRSELVRIEKVLKRERELIAAKELIDQIAGLEEKLKEYDLEKLMKKAEEYEGVKSELSRL
EGELESTKAELEKAKALKKKRTLAEEKLKSIEEKLRKLDEELEGMGFSKIEELDEKLAEL
EPSYKRYLELKNSEKEFEREKNNLERLTLELEEVKRSLDAESKALNALMDELAKKEKLYS
REEHEKTREAFASLREELAGKKAQLEALEKKRDETMENLRKLKEEKDRRKEKTKELEELK
KARERVQELREKVRRYKAMLKEGALAKVGEIASEIFEELTEEKYSGVTVKAEENKIRLGV
LYNGREYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDDERRRRLVDIM
QRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaaaagctcataatcaaggacttccgctcccacgggctgaccaaggttaac
ttcacgagcgggataaacctcataatcggacagaacggctctggaaagagctcccttctc
gatgcgctcctcgtcggcctctactggccgagcaagcccaaagacctcagaaaggaggac
atactcagggtggacggaaagtccacggagataacggtcttcttcgagaaggacggcgtc
aaataccagctccacaggaacataaccaggggaatggccttcgccaagtaccacgacgga
agctcctggaagcacgccacggagacgagccaaaaagctgtaagggactggatggagaag
ctagttccgtacgacgtcttcctcaacgcgatttacataaggcagggggagatcgatgcc
atccttgagagcgacgagagcagggagaaggtcgtccgccaggttctcggtctcgacagg
tatgaaaacgcctacaagaacctcctcgaagtgagaaaagagatagaacgcaggataaaa
tcgacggaggactacctgaagagcacggaaaacctcgacgagctgatcggggagatggag
agggagctctcaaacgccctcaaagagataaacaagctctcacctcagattccaaagctg
gagaaggaactggaaagggtggagaaaaagctcggggagcttgatgccctggagaaggag
ataaactctctcagacttgaggccaaggagagggaagggaaccgaaagcggcttgagacg
aagctggaggggcttgagaaacgcatagccgagagcaaacaaagattgagtgagctggag
gaacgggtgaaggagttccgtaagttaaaggagaaagccgagctctacctgaagctctcg
aacttcaggaagcgctatgtggacgagaaggccagaaacgagaagctcgccgagaactac
agggcacagatttcggcgatagaggagcgcctcgccgagctgagtgaactggagaagcgc
ctcaaggagctggagaaagagaggggcaagctcgagaggaaactcaagaggctcgaaaag
gacgcccgggcgtacgaagatgccaaatcattgtcgtcgcagctggaaggcctcagaaaa
cgcctcaagctctccagagaagagatagaaaagctctccgccgaggtcgagggtgcaaag
aggaggaaggaagagatacaggttgagctaaacgagataaacgaggagcgcggtggactg
aaaaacctggtcaaggagaggaacaaggccataatggagctgaagaaggccaagggcaac
tgtcccgtctgcggcagaaagctaaccgagaagcacaggaaggagataatcgagaagtac
caggccgagctcaaggaggtatcccagtccctgaaggaactcgacgagagggagagaaag
ctcaggagcgagcttgtcaggatagagaaggttctgaagagggaacgcgagctgatagcc
gccaaggagctcattgaccagatagccggccttgaggagaagctgaaggaatacgacctt
gagaagctcatgaaaaaggcggaagaatacgagggagtgaagagcgaactgagcaggctc
gagggcgagctggagagcacgaaggccgagcttgagaaggcgaaggccctcaaaaagaag
aggacactcgccgaggagaaactcaagtcgatcgaggagaagctgagaaagctcgatgaa
gagctcgaggggatgggcttctccaagatagaggagctcgacgaaaagcttgccgagctt
gaaccgtcctacaagcgctacctcgaactgaagaactccgagaaagagttcgagagggag
aagaataacttggagcggctcacgctggagcttgaggaggtaaaacgcagcctggatgcc
gagagcaaagccctgaacgcgctgatggatgagctggcaaagaaagagaagctttacagc
agggaggagcacgaaaagacccgggaagccttcgcctcgctcagggaggagctggccgga
aagaaggcccagctggaggccctagagaagaagcgcgacgagaccatggagaacctccgg
aaactcaaggaggagaaggaccgcagaaaggagaagacaaaggaacttgaggagcttaag
aaggcccgcgagagggttcaggagctcagggagaaggtgaggcgctacaaggccatgctc
aaggagggggcgctggcgaaggtcggtgagatagccagcgagatattcgaggagctgacc
gaggagaagtactccggggttaccgtgaaggcggaggagaacaagataaggctcggggtg
ctgtacaacggcagggaatacggcctcggattcctcagcggaggagagaggatagccctc
ggcctggccttccggctggcgctctcgctctatctcgcgggcgagataagcctgctcatc
ctggacgagccaacgccttacctcgacgacgagaggaggagaaggctcgttgacataatg
cagcgctacctgaggaagataccgcaggtcatagtcgtttcacacgacgaagagctgaaa
gatgccgccgacagggtgatacgggtgagccttgagaacggcgtctcggtggtcaaagag
gtcgagctgggggtgtga
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