KEGG   Thermococcus sp. 5-4: CDI07_07730
Entry
CDI07_07730       CDS       T05088                                 
Name
(GenBank) ATP-binding protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
thh  Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:thh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:thh03400]
    CDI07_07730
DNA repair and recombination proteins [BR:thh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CDI07_07730
    Archaeal homologous recombinant proteins
     CDI07_07730
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_15 SMC_N AAA_13 AAA_29 AAA_21 ABC_tran SbcC_Walker_B Baculo_PEP_C HMBD FtsK_SpoIIIE ABC_ATPase Crescentin RsgA_GTPase ApbE ORF11CD3 DUF1664
Other DBs
NCBI-ProteinID: ASA78190
UniProt: A0A1Z2TP26
LinkDB
Position
complement(1396059..1398716)
AA seq 885 aa
MKIEKLIIKDFRSHGLTKVNFTSGINLIIGQNGSGKSSLLDALLVGLYWPSKPKDLRKED
ILRVDGKSTEITVFFEKDGVKYQLHRNITRGMAFAKYHDGSSWKHATETSQKAVRDWMEK
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYKNLLEVRKEIERRIK
STEDYLKSTENLDELIGEMERELSNALKEINKLSPQIPKLEKELERVEKKLGELDALEKE
INSLRLEAKEREGNRKRLETKLEGLEKRIAESKQRLSELEERVKEFRKLKEKAELYLKLS
NFRKRYVDEKARNEKLAENYRAQISAIEERLAELSELEKRLKELEKERGKLERKLKRLEK
DARAYEDAKSLSSQLEGLRKRLKLSREEIEKLSAEVEGAKRRKEEIQVELNEINEERGGL
KNLVKERNKAIMELKKAKGNCPVCGRKLTEKHRKEIIEKYQAELKEVSQSLKELDERERK
LRSELVRIEKVLKRERELIAAKELIDQIAGLEEKLKEYDLEKLMKKAEEYEGVKSELSRL
EGELESTKAELEKAKALKKKRTLAEEKLKSIEEKLRKLDEELEGMGFSKIEELDEKLAEL
EPSYKRYLELKNSEKEFEREKNNLERLTLELEEVKRSLDAESKALNALMDELAKKEKLYS
REEHEKTREAFASLREELAGKKAQLEALEKKRDETMENLRKLKEEKDRRKEKTKELEELK
KARERVQELREKVRRYKAMLKEGALAKVGEIASEIFEELTEEKYSGVTVKAEENKIRLGV
LYNGREYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDDERRRRLVDIM
QRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgaagattgaaaagctcataatcaaggacttccgctcccacgggctgaccaaggttaac
ttcacgagcgggataaacctcataatcggacagaacggctctggaaagagctcccttctc
gatgcgctcctcgtcggcctctactggccgagcaagcccaaagacctcagaaaggaggac
atactcagggtggacggaaagtccacggagataacggtcttcttcgagaaggacggcgtc
aaataccagctccacaggaacataaccaggggaatggccttcgccaagtaccacgacgga
agctcctggaagcacgccacggagacgagccaaaaagctgtaagggactggatggagaag
ctagttccgtacgacgtcttcctcaacgcgatttacataaggcagggggagatcgatgcc
atccttgagagcgacgagagcagggagaaggtcgtccgccaggttctcggtctcgacagg
tatgaaaacgcctacaagaacctcctcgaagtgagaaaagagatagaacgcaggataaaa
tcgacggaggactacctgaagagcacggaaaacctcgacgagctgatcggggagatggag
agggagctctcaaacgccctcaaagagataaacaagctctcacctcagattccaaagctg
gagaaggaactggaaagggtggagaaaaagctcggggagcttgatgccctggagaaggag
ataaactctctcagacttgaggccaaggagagggaagggaaccgaaagcggcttgagacg
aagctggaggggcttgagaaacgcatagccgagagcaaacaaagattgagtgagctggag
gaacgggtgaaggagttccgtaagttaaaggagaaagccgagctctacctgaagctctcg
aacttcaggaagcgctatgtggacgagaaggccagaaacgagaagctcgccgagaactac
agggcacagatttcggcgatagaggagcgcctcgccgagctgagtgaactggagaagcgc
ctcaaggagctggagaaagagaggggcaagctcgagaggaaactcaagaggctcgaaaag
gacgcccgggcgtacgaagatgccaaatcattgtcgtcgcagctggaaggcctcagaaaa
cgcctcaagctctccagagaagagatagaaaagctctccgccgaggtcgagggtgcaaag
aggaggaaggaagagatacaggttgagctaaacgagataaacgaggagcgcggtggactg
aaaaacctggtcaaggagaggaacaaggccataatggagctgaagaaggccaagggcaac
tgtcccgtctgcggcagaaagctaaccgagaagcacaggaaggagataatcgagaagtac
caggccgagctcaaggaggtatcccagtccctgaaggaactcgacgagagggagagaaag
ctcaggagcgagcttgtcaggatagagaaggttctgaagagggaacgcgagctgatagcc
gccaaggagctcattgaccagatagccggccttgaggagaagctgaaggaatacgacctt
gagaagctcatgaaaaaggcggaagaatacgagggagtgaagagcgaactgagcaggctc
gagggcgagctggagagcacgaaggccgagcttgagaaggcgaaggccctcaaaaagaag
aggacactcgccgaggagaaactcaagtcgatcgaggagaagctgagaaagctcgatgaa
gagctcgaggggatgggcttctccaagatagaggagctcgacgaaaagcttgccgagctt
gaaccgtcctacaagcgctacctcgaactgaagaactccgagaaagagttcgagagggag
aagaataacttggagcggctcacgctggagcttgaggaggtaaaacgcagcctggatgcc
gagagcaaagccctgaacgcgctgatggatgagctggcaaagaaagagaagctttacagc
agggaggagcacgaaaagacccgggaagccttcgcctcgctcagggaggagctggccgga
aagaaggcccagctggaggccctagagaagaagcgcgacgagaccatggagaacctccgg
aaactcaaggaggagaaggaccgcagaaaggagaagacaaaggaacttgaggagcttaag
aaggcccgcgagagggttcaggagctcagggagaaggtgaggcgctacaaggccatgctc
aaggagggggcgctggcgaaggtcggtgagatagccagcgagatattcgaggagctgacc
gaggagaagtactccggggttaccgtgaaggcggaggagaacaagataaggctcggggtg
ctgtacaacggcagggaatacggcctcggattcctcagcggaggagagaggatagccctc
ggcctggccttccggctggcgctctcgctctatctcgcgggcgagataagcctgctcatc
ctggacgagccaacgccttacctcgacgacgagaggaggagaaggctcgttgacataatg
cagcgctacctgaggaagataccgcaggtcatagtcgtttcacacgacgaagagctgaaa
gatgccgccgacagggtgatacgggtgagccttgagaacggcgtctcggtggtcaaagag
gtcgagctgggggtgtga

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