Thermococcus sp. 5-4: CDI07_07750
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Entry
CDI07_07750 CDS
T05088
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thh03016
]
CDI07_07750 (endA)
Enzymes [BR:
thh01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CDI07_07750 (endA)
Transfer RNA biogenesis [BR:
thh03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CDI07_07750 (endA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
ASA78194
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All DBs
Position
1402519..1403034
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AA seq
171 aa
AA seq
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MKEPIVFQLSGDRVFSEREKAINQFYNKRYFGEVVNGKLFLSLIEAAYLMEKGKIRVFDG
EKELSFKELVELGRKRDDQFDIKLLVYTDLRDRGYTVKSALKFGSHFRVYRRGMDEHSQW
LIWVVPENLRFSPNDITARVRVAHGVRKNMVMAVVDEDNDVVYYKIEWVKF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggagccgatagtctttcagctcagcggggacagggtcttcagcgagcgcgaaaag
gcgataaaccagttctacaacaagaggtatttcggcgaggtcgtgaacgggaagctcttt
ctctcgctcatagaagctgcctacctgatggagaagggcaagataagggtttttgatggc
gagaaagagctttctttcaaggaactggtcgagctcggaaggaagcgcgacgaccagttc
gacataaagctcctcgtctacaccgacctgcgcgacaggggctacaccgtcaagtccgcc
ctcaagttcggctcgcacttccgcgtttacaggcgcggaatggacgagcactcccagtgg
ctgatatgggtcgtccccgagaacctccgcttcagcccgaacgacatcaccgcccgcgtg
agggttgcccacggcgtcagaaagaacatggtgatggccgtcgtcgacgaggacaacgac
gtggtgtactacaagatagaatgggtgaagttttag
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