KEGG   Thermococcus sp. 5-4: CDI07_07775
Entry
CDI07_07775       CDS       T05088                                 
Name
(GenBank) replication protein C
  KO
K04800  replication factor C large subunit
Organism
thh  Thermococcus sp. 5-4
Pathway
thh03030  DNA replication
Brite
KEGG Orthology (KO) [BR:thh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDI07_07775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thh03032]
    CDI07_07775
DNA replication proteins [BR:thh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     CDI07_07775
SSDB
Motif
Pfam: AAA Rad17 AAA_14 RCF1-5-like_lid AAA_22 RuvB_N AAA_5 AAA_11 nSTAND3 AAA_16 AAA_6 AAA_30 DUF815 TIP49 AAA_17 Nop53 Zeta_toxin AAA_19 ResIII PPV_E1_C AAA_assoc_2 AAA_7 AAA_28 NPHP3_N IPT AAA_33 TsaE AAA_25 DNAX_ATPase_lid Parvo_NS1 AAA_24 Hydin_ADK SPATIAL
Other DBs
NCBI-ProteinID: ASA78199
UniProt: A0A1Z2TP48
LinkDB
Position
1406777..1408261
AA seq 494 aa
MPRDVPWVEKYRPRRLGELINQTKALGQVKAWIEAWLQGSPPKKKALILAGPPGTGKTAT
VYAIAREYGFEIIELNASDERTYEKVERYVQAAYTLDILGKRRKLIFLDEADNMEPSGAR
EIAKLIDRARNPIIMSANHYWEVPREIRNKAQIVEYKRLTQRDIIKGLVRILHAEGLTVP
KEVLYEIAKRANGDLRAAINDLQTVVSGGIEDAVDVLAYRDTEKSVFQALAQLFATDNAK
KAKLVVLGVDMFPHELLQWIDENLPYVYYKPEDIARAYEALSRADIYLGRAQRTGNYGLW
KYATDMMTAGVAVAGVKRKGFVRIYPPKTIKLLTESKAERGLRDSVLKKIMKEMHMAKLE
ALETLNVLKAIFEYNPDMAAHFVVYLDLDLKEVEFIVGDKEKARTIWGKSMNIEKKLKER
GELEEHVRVAAEKEEEIEPTEEEEVEEEAEEEISEEELEKAEEEMEAVEESGEKIDKPKK
KGKQATLFDFLGKK
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgccgcgggacgttccttgggttgagaagtaccggccgagacgcctgggggagctgata
aaccagaccaaggccctgggacaggtgaaggcatggatagaggcgtggctccagggcagt
ccgccgaagaagaaggcgctgatcctggccggccctccgggaacaggtaagactgcgacg
gtgtatgccatagcccgggagtacggcttcgaaataatcgagctcaacgccagcgacgag
aggacatacgagaaggtggagcgctacgttcaggctgcctacaccctcgacatcctcggg
aagaggaggaagctcatattcctcgatgaagccgacaacatggagccgagcggggcgagg
gagatagcgaagctgatagatagagccagaaatccgataatcatgagcgccaatcactac
tgggaagtcccgagggagataagaaacaaggcccagatagtcgagtacaagcgcctgacc
cagagggacatcataaagggactcgtgaggatcctccacgcggagggcctgacggttccg
aaggaggtgctctacgagatagccaagcgcgccaacggtgatctgagggctgcaataaac
gacctccagacggttgtgtccggcgggatagaggatgccgtcgacgttctcgcctaccgc
gacacggaaaagagcgtcttccaggctttggctcagctcttcgcaaccgacaacgccaag
aaggccaagctggtcgttctcggcgttgacatgttcccccacgagctcctccagtggata
gacgagaaccttccctacgtctactacaagcccgaggacatagcgagggcctacgaggct
ctgagtagggcggacatatacctcggaagggcgcagaggacggggaactacggcctctgg
aagtacgccacggacatgatgacggcaggggttgcggttgctggcgttaagaggaagggc
ttcgtgagaatttatccacccaagaccataaagctcctcacggagagcaaggccgagagg
ggactaagggactcggtgctcaagaagataatgaaggagatgcacatggcgaagctcgaa
gccctggagaccctcaacgtcctgaaggcaatattcgagtacaacccagacatggcggcg
cacttcgtcgtttacctcgaccttgacctcaaggaggtcgagttcatagtcggggacaag
gagaaggccaggactatatggggcaagagcatgaacatcgagaagaagctcaaggagcgc
ggtgagcttgaggagcacgtgagggttgccgctgagaaggaagaagaaattgagcccacg
gaagaggaagaagtcgaggaagaggcggaggaagagataagcgaggaagagcttgagaag
gccgaggaggaaatggaagccgtcgaggaaagcggggagaagatagacaagcccaagaag
aagggcaagcaggcgacgctgttcgacttcctcgggaagaagtga

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