Thiomonas arsenitoxydans: THI_0328
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Entry
THI_0328 CDS
T02347
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thi
Thiomonas arsenitoxydans
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thi03016
]
THI_0328
Enzymes [BR:
thi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
THI_0328
Transfer RNA biogenesis [BR:
thi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
THI_0328
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
CAZ87078
UniProt:
D6CR37
LinkDB
All DBs
Position
331929..332489
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AA seq
186 aa
AA seq
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MFDTPLDPPPDPPAALRLFFALWPGQALRRHIAEHQRLWQWAPPARPAAATKLHLTVLFM
EGVPADRVTTLLEVGERVARNWADFALTLDRAAVWRHGGIAHLTPSQPPAELLSLRAALA
EQVGQRGLPFDARAFAPHVTLARRAQATQPPVTFPPLHWTVRGFALVHSVLGTGRYDVIG
RWPLNR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacacgccgctcgatcccccgcctgacccacccgctgcgctgcggctgtttttc
gcgctctggccggggcaggcgttgcgccgacatatcgccgagcatcagaggctttggcag
tgggcgccgcccgcgcgaccggcggctgcgaccaaactgcatctcaccgtgttgttcatg
gagggggtgcccgcagaccgggtgacgacgctgctggaggtgggcgaacgggttgcgcgc
aactgggccgatttcgcgctcacgctcgaccgggcagcggtgtggcgccacggtggcatc
gcgcacctcacgccgtcgcagcccccggcggaattgctgtcgttgcgcgccgcgctggcg
gagcaggtcggccagcgcggtctgccgttcgacgctcgcgccttcgcaccgcatgtcacg
ctggcgcggcgcgcgcaggcgacgcagccgccggtcacattcccgccgctgcactggaca
gtgcgcggcttcgcgctggtgcactccgtgctgggcaccgggcgttacgacgtcatcggg
cgctggccgctgaatcgatga
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