Thiomonas arsenitoxydans: THI_0364
Help
Entry
THI_0364 CDS
T02347
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THI_0364 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thi03019
]
THI_0364 (rhlE)
Enzymes [BR:
thi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THI_0364 (rhlE)
Messenger RNA biogenesis [BR:
thi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
THI_0364 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
HEM4
Motif
Other DBs
NCBI-ProteinID:
CAZ87114
UniProt:
D6CR73
LinkDB
All DBs
Position
complement(370052..371653)
Genome browser
AA seq
533 aa
AA seq
DB search
MSFQDLGLIEPLVRAVAEQGYTVPTPIQLQAIPVVLAGHDLLAAAQTGTGKTAGFTLPML
QRLSGGEPARNAKGKIIPRALILTPTRELAAQVHENLAAYGRHLKLHSMAMYGGVGMQPQ
INALARGMDIVVATPGRLLDHQSQRNIDLSAVQMLVLDEADRMLDMGFVHDMRRIVALLP
KQRQNLLFSATFSEEIKRLAGDFLVNPQQVAVARQNATADLVEQIVFPVDRERKRDMLVH
LIRERNWPQTLVFTRTKHGANRLAEQLDKDGIVATGFHGNKTQSARLRALADFKSGKLQV
LVATDIAARGIDIDQLPVVVNYELPNIPEDYVHRIGRTGRAGSNGQAISLVCVDELGFLR
DIEKLVRNPITQEVIPGFEPDPNAKAQPIVMGRTVLHGGERRGGKGGGGAGGGQGQRRSG
ASAGNRGASRNGPGQGQGRAQTPASAKPQGQRASGRSAKPSASTASKVPPEQRADAWQGT
PWVELDLPPHMRNGQGRGRRPAGAGGGAGRPASANGNSFGGGQRRPGGGQRGR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaagatctgggcttgatcgagcccctcgtgcgtgctgttgccgaacaaggc
tacaccgtacccactcccattcaactccaggccattccggttgtgctcgcagggcatgat
ctgctggccgcggcgcagaccggcaccggcaaaacggccggcttcaccctgcccatgctg
cagcgcctgagcggcggcgaacccgctcgcaacgccaagggcaagatcattccccgcgcc
ctgatcctcactcccacccgcgagctggctgcgcaagtgcatgaaaaccttgccgcctac
ggccgccacctcaagctgcacagcatggcgatgtatggcggcgtaggcatgcagccgcag
atcaacgccctggcgcgcggcatggacatcgtcgtggccacgcccggccgtctgctcgac
caccaaagccagcgcaatatcgacctgtccgcggtgcaaatgctggtgctcgacgaagcc
gaccgcatgctcgacatgggcttcgtccacgatatgcgccgcatcgtcgccctgctgccc
aagcagcgccagaacctgctgttctccgccaccttctctgaagagatcaagcggctggcc
ggtgactttttggtcaacccgcaacaggttgccgtcgcacgccagaacgccacggccgat
ctggtcgaacagatcgtgttccccgtcgaccgcgaacgcaaacgcgacatgctggtccac
ctcatccgcgaacgcaactggccgcagaccctggtgttcacccgcaccaagcacggcgcc
aaccgtctggccgaacagctcgacaaggacggcattgtcgccaccggttttcacggcaac
aaaacccagtccgcccgcctgcgcgccctggccgacttcaagagcggcaagctgcaggtg
ctcgtcgctaccgatatcgccgcgcgcggcatcgacatcgaccagcttccggtcgtggtg
aattacgaactacccaacatccccgaagactatgtgcaccgcatcggccgcaccggccgc
gcgggcagcaacgggcaagccatttcgctggtctgcgtggacgaacttggcttcctgcgc
gacatcgaaaagctagtgcgcaaccccatcacgcaagaggtcattccgggcttcgagccc
gaccccaacgccaaggcgcagcccatagtgatgggccgcaccgtgctgcatggcggcgag
cgccgcggcggcaagggtggaggcggcgcgggtggtggccaaggtcaacgccgcagtggt
gcaagcgcaggcaatcgcggcgcaagccgcaacggccccggtcagggccaagggcgcgcc
cagacacccgccagcgctaaaccgcaaggccagcgcgcatccgggcgcagcgcaaagccc
tcagccagcaccgcgagcaaggttccgcctgagcaacgcgccgatgcctggcaaggcacc
ccctgggtcgaactcgacctgccgccgcacatgcgcaacggccagggccgaggacgccgg
cccgctggagccggaggcggcgctgggcgtccagcctcggcgaatggcaacagtttcggc
ggcggacaacgccgaccgggcggaggtcagcgagggcgttga
DBGET
integrated database retrieval system
