Thiomonas arsenitoxydans: THI_0379
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Entry
THI_0379 CDS
T02347
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THI_0379 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_0379 (mutM)
Enzymes [BR:
thi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
THI_0379 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
THI_0379 (mutM)
DNA repair and recombination proteins [BR:
thi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THI_0379 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
NFACT_N
zf-C2H2_DHX34
DUF5817
Motif
Other DBs
NCBI-ProteinID:
CAZ87129
UniProt:
D6CR88
LinkDB
All DBs
Position
complement(385411..386286)
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AA seq
291 aa
AA seq
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MPELPEVEVTRQGLEPALLGARLTGLRLGKPLRWPLNIDPQTLVGLRIKALERRGKYLLL
RLSQTAAAPNTAGVLIVHLGMSGSLRWTPAAQAPAPLSPHEHVEWLTDRGVLRLRDPRRF
GAVLWHAGDEVQRHPLLRVLGPEPLGADFDGATLCRALAGRKAAIKPLLLSQHIVAGIGN
IYACEALFRAQIDPRTPASHLRPVHCDRLAAAVRETLRQAVALGGSSLRDFAHSDGELGY
FQMQALVYGRAGQPCRVCATPIRQIVQGQRSTYFCPKCQKILKAKPKAGIR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaagtcacccgccagggtctggagcccgccttgctcggc
gcccgcctgaccggtctgcgcctgggtaaaccgctgcgctggccgctgaacatcgacccg
caaacgctggtcgggctgcgcatcaaagcgcttgagcggcgcggcaaatatctgctgctg
cgactgtcgcagaccgccgccgcgccgaacaccgcaggcgtgctgatcgtgcatctgggc
atgtcgggttctttgcgctggacaccggccgcgcaagcgcccgccccgctgtcgccgcac
gagcatgtggaatggctgaccgaccgcggggtgctgcgcctgcgcgatccgcgccggttc
ggcgcggtgctctggcacgcgggtgacgaggtgcagcgccatcccctgctgcgcgtgctc
gggcccgagccgctgggcgccgacttcgacggcgccacactctgccgcgcgctggccgga
cgcaaggcggcgatcaagccgctgctgctgtcgcagcacatcgtcgccggaattggcaat
atctacgcctgcgaggctctgtttcgcgcgcagatcgacccgcgcacaccggcttcgcat
ctgcgccccgtccattgcgatcgtctggccgcggcggtacgcgaaactttgcgacaggcg
gtggcgctggggggcagcagcctgcgcgactttgcccacagcgatggcgaactgggttat
ttccagatgcaggcgctggtttacggccgagccgggcagccttgtcgcgtctgcgccacg
cccatccggcagatcgtgcaggggcagcgcagtacctatttctgccccaagtgccaaaaa
attctcaaagccaagcccaaggcggggatacgctga
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