Thiomonas arsenitoxydans: THI_0404
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Entry
THI_0404 CDS
T02347
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B)
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
thi
Thiomonas arsenitoxydans
Pathway
thi00470
D-Amino acid metabolism
thi00550
Peptidoglycan biosynthesis
thi01100
Metabolic pathways
thi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THI_0404 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THI_0404 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
THI_0404 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thi01011
]
THI_0404 (ddlB)
Enzymes [BR:
thi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
THI_0404 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
thi01011
]
Precursor biosynthesis
Amino acid ligase
THI_0404 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
GARS_A
ATP-grasp_3
ATP-grasp_4
TTL
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
CAZ87154
UniProt:
D6CRB3
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All DBs
Position
413220..414356
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AA seq
378 aa
AA seq
DB search
MTPWPQIDPRGLGRVAVLMGGLSAEREVSLMSGKGVLAALQSRGVDAFAFDPSVDDLAAL
KSFGAQRAFINLHGRWGEDGTVQGALELLGIPYTGPGVLASALAIDKAMTKRLWHFENLS
TPKWREVGTLIEARAAAAELGFPLIFKATHEGSTLGLKRADSEAEVQAAYLEAARFDSRV
LVEQFIEGDEVTCAVIGAGDQARALPLIRIVAPGGNYDYEHKYFSDDTRYICPSELPADE
EARIQDLVLRSYRTLGCRGWARADVMIRATDRQPFLLEINTSPGMTSHSLVPMAARVAGL
EYADLCLLILSMAALDQPHKGVDPQAAASPALPPEEAIPTPALPTSGEGANTPPPRRGGG
WEGEKPALGRPGGGRSDR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctggccgcaaatcgatccgcgcggtctgggccgggtcgcggtgctcatgggc
ggtctttccgccgaacgtgaggtatcgctgatgtcgggcaagggcgtgctcgccgcgctg
caatcgcgcggggtcgatgcctttgctttcgatccgtcggtggacgacctggcggcgctc
aagtcgtttggtgcgcagcgcgcgttcatcaatctgcatggccgctggggtgaggacggc
acggtgcagggcgcgctggaactgctgggcattccctacaccgggccgggcgtgctggcc
tcggccctggcgatcgataaggccatgaccaagcggctgtggcatttcgagaacctgtcc
acacccaagtggcgcgaggtgggcacgctcatcgaggctcgcgcggcggcggccgagctg
ggctttccgctgattttcaaggccacgcatgaaggctccacgctgggtctgaaacgcgcc
gacagcgaggccgaagtgcaagccgcctatctcgaagccgcacgcttcgacagccgggtg
ctggtggagcagttcatcgagggcgacgaagtgacctgcgcggtaatcggcgcgggcgat
caggcgcgggcgctgccgctcattcgcatcgtcgcccccggcggcaactacgactacgaa
cacaagtatttcagcgacgacacccgctacatctgcccaagcgaattgcctgccgacgaa
gaagcgcgcattcaggatctggtcttgcgcagctatcgcacgttgggctgccgcggctgg
gcgcgggccgacgtcatgattcgcgcgaccgaccgccagccctttctgctggagatcaac
acctcgcccggcatgacctcgcattcactggtgcccatggccgcgcgcgtggccgggctg
gaatacgccgatctgtgtctgctcatcctcagcatggcggcgctcgatcaaccgcataag
ggggttgacccccaagctgcggcttcgcctgcgctgccccccgaggaggccatccccacc
ccggccctccccacaagtggagagggagcaaacactcctcccccacgccgtgggggaggt
tgggagggggaaaagcccgccttggggcggcccggcggcgggaggagcgaccgatga
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