Thiomonas arsenitoxydans: THI_1164
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Entry
THI_1164 CDS
T02347
Name
(GenBank) putative Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thi
Thiomonas arsenitoxydans
Brite
KEGG Orthology (KO) [BR:
thi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thi03400
]
THI_1164
Enzymes [BR:
thi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THI_1164
DNA repair and recombination proteins [BR:
thi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THI_1164
Prokaryotic type
THI_1164
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAZ87857
UniProt:
D6CPC7
LinkDB
All DBs
Position
1151810..1153291
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AA seq
493 aa
AA seq
DB search
MSTLALVWFKRDLRVQDHAALHAAAQCDAALALFVMEPEWIASPECDAQHVQFAADCVSA
LQESLAGLGLRLLVRVGDVPQVFEDIRREVRFTHLFSHEETGPGWTYARDKRVAHWCREQ
GVIWQEWPQNGVVRRLRDRAGWAARWQRRMDAPQLPVPQALRDASKPLAAGDFPALRDLR
LPAARPMSAAGTAAALSTLHSFLDTRGAQYRRDLSSPLTAERGCSRLSAHLAFGTLSMRQ
VHQATEQRIRALQASGEAPARSMAYHLRGFAGRLRWHCHFMQKLEDEPGIEFHNFARAYD
GLREPEFNPAYFEAWCSGNTGFPMVDACMRCLNATGWINFRMRAMLVSFAAYHLWLHWRE
PGLHLARQFLDFEPGIHWSQMQMQSGTTGINTLRVYSPAKQQADHDPQGEFIRQWVPEWG
TSAYPPPIVNERSAVKQAKDRIYAIRQSPQASDEARAVQQRHGSRKSGLPPSGSRSRKPV
APPALPRQQELFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttggcgctagtttggttcaaacgcgacctgcgtgtgcaggatcacgccgcg
ttgcatgccgccgcgcaatgcgatgcggcgctggcgctttttgtgatggagccggaatgg
atcgccagcccggaatgcgatgcgcagcatgtgcagttcgcggcggattgcgtttccgcg
ctgcaggagtcgctcgcgggtcttggactcaggctgttggtgcgcgtgggcgatgtgcct
caggtgttcgaggacattcgccgcgaggtgcgtttcacccatctgttcagccatgaagaa
accggtccaggctggacctatgcgcgcgacaagcgggtggcgcattggtgccgagagcaa
ggcgtgatctggcaggaatggccgcaaaacggcgtggtgcgccgtctgcgtgatcgtgcg
ggctgggcggcccgctggcaaaggcgcatggatgcgccgcagctgcctgtgccgcaagcc
ctgcgcgacgcatcaaagccgttggcagcgggcgactttccggccctgcgcgatctgcgc
ttgcccgcggcccgccccatgtctgctgcaggcacggcggcggccctgtccactctgcac
agctttctggatacgcggggcgcgcagtaccggcgcgatctgtccagcccgctgacggca
gaacgcggctgctcgcgcctgagcgcgcatctggcctttggcacgctctccatgcggcaa
gtgcatcaggccaccgagcaacgcattcgcgcgttgcaggctagtggcgaggcgccggcg
cgcagcatggcgtatcacctgcgcggttttgccgggcggctgcgctggcattgccacttc
atgcaaaagctcgaagatgaaccgggcatcgagttccacaactttgcgcgtgcctacgac
ggtttgcgcgagcccgaattcaaccccgcgtatttcgaggcctggtgcagtggcaacacc
ggcttcccgatggtggacgcctgcatgcgctgcctcaacgcaaccggctggatcaacttt
cgtatgcgcgccatgctggtgagttttgccgcctatcacctgtggttgcattggcgcgag
ccggggctgcatctggcgcggcagtttctcgatttcgagccgggcattcattggagccag
atgcaaatgcaatcgggcaccacgggcatcaacaccctgcgcgtgtattccccggccaag
cagcaggctgaccatgatccgcagggcgagttcatccgccagtgggtgccggagtggggg
acttcggcttacccgccgcccatcgtcaatgagcgcagcgccgtcaagcaggccaaagac
cgcatctacgccatccgccaaagcccacaggcgagcgacgaggcgcgggcggtgcaacag
cggcacggctcgcgcaagagcggcctgccgcccagcggctcccgctcgcgcaagccggtt
gcgccacccgcgctaccgcgacagcaggagttgttcgaatga
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